Gene BBta_3654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3654 
Symbol 
ID5153457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3819781 
End bp3820482 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content65% 
IMG OID640558497 
Productputative nodulin-related protein 
Protein accessionYP_001239643 
Protein GI148255058 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC TTCACGTCCA TCCGGAAAGC CACCTGGTGG CGCGGATCGG ATGGCTCAGG 
GCGGCCGTTC TGGGCGCCAA TGACGGCATC ATTTCGACTG CGAGCCTGAT CGTCGGTGTT
GCCGCGGCAG CAGCGACTCG AAACGACGTC CTGATCGCCG GCGTTGCGGG GCTGGTCGCT
GGAGCGATGT CGATGGCCGC CGGAGAATAT GTCTCGGTCA GTTCGCAGTC GGACACGGAG
CAGGCCGACC TTGCGCGAGA GCGCAAGGAA CTCAGCGACA ACCCGGCATT TGAACGCGAT
GAGCTTGCCG ACATCTACAT CAAGCGGGGT GTCGAGCAAT CCCTGGCGCG GCAGGTGGCG
GAGCAGTTGA TGGCGAAAGA CGCACTGACA GCTCATGCGC GTGATGAATT GGGAATATCC
GAGATCACCG CAGCGCGGCC TATCCAGGCT GCCCTGACCT CGGCCATGAT GTTTTCGGTG
GGGGCCGCCA TGCCCTTGCT GATGGTCGTC CTGTCGCCGG TCAACGCGCT GGTCCCGATC
GTGTCCGCGG CGTCTCTCGC CTTCCTCGCG GTGCTGGGTG CGATCGGCGC AAAGGCGGGC
GGGGCGAACA TTCCGCGCGC CACGGTTCGC GTGACGTTCT GGGGGGCTTT CGCCCTCGGT
CTCACCGCAG GCATCGGAAA GCTGTTTGGG GCCGTCGTTT GA
 
Protein sequence
MSRLHVHPES HLVARIGWLR AAVLGANDGI ISTASLIVGV AAAAATRNDV LIAGVAGLVA 
GAMSMAAGEY VSVSSQSDTE QADLARERKE LSDNPAFERD ELADIYIKRG VEQSLARQVA
EQLMAKDALT AHARDELGIS EITAARPIQA ALTSAMMFSV GAAMPLLMVV LSPVNALVPI
VSAASLAFLA VLGAIGAKAG GANIPRATVR VTFWGAFALG LTAGIGKLFG AVV