Gene BBta_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3650 
Symbol 
ID5153679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3817101 
End bp3818342 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content62% 
IMG OID640558494 
Productputative amino acid permease 
Protein accessionYP_001239640 
Protein GI148255055 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.171718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATCG AGGCTGCTGG CTCGCCGGCC GAGTCGCAGC GCCTGTTGCG GTCACTGTCG 
CTGACCCAAG CGGTGCTTTA TGGCCTTGGC GTCACCATCG GCGCAGGAAT CTACGTCCTG
GTCGGGATCG CCGCGGCACG CAGTGGTATG CATGCGCCAC TTGCCTTCAT CGGTGCAGCC
CTTGTGATGG CGTTCAGTGC AGCATCATTC GCCGAACTGG GAACGCGCAT GCCCGTCAGC
GCCAGCGAGG CCGCTTATGT GCAGGCCGCT TTTGGTCGCA AATGGCTCAG CCTCGGGGTC
GGGCTTCTGG TGGTCGCGAC GGCAACAATC TCCGCCGCAA CCATCAGTGT TGGTAGCTCG
GGCTATGTTG CCGTGTTTCT GCCGATTTCG GCTCCGTGGA TCATCTCGGG AGTCGTTCTT
GCGATGGGCG TCGTGGCGTG TCTCGCCACG GCCCAATCCG TCACCTTCGC CGGGATCATG
ACGGTTGTCG AGGTGGGCGG TCTCGTGCTG ATCATTGTGA CTGGCCTCGG TCACGGGACG
GATGTTGTCA CACGCCTGCC GGAAATGTGG CCGCCGACAC GTGATACGGA GGCCTGGATT
GGATTGGGCG GAACGGCCCT CATCGCAGTC TTTTCCTTCA TCGGCTTCGA GCACGTGGTC
AACATTGCGG AGGAAATGAA GGAGCCGAGT CGCACCCTGC CCCGTGCGCT GTTCCTGACC
CTCGGTTTGA CCGCGCTGAT CTACGCGCTG GTTGTGTGGA TTGCCGTCAC GGCGGTACCT
CCGCAGGAAC TCGCGCGCTC ATCGGCACCG CTTGCGCTGG TCTTCGAGCG ACTGACAGGC
CTGCCGCTCG TCACCATGAG CGCAATCGCC ATTGTGGCCA CGCTCAACGG CATCATTGTG
CACATGATCA TGATCGGTCG CGTCATCTAT GGTCTCGCGG ATCAAGGCAA TTTGCCAAGG
GTCTTTGCCC GGTTGAATTC GGTCACGCAG ACGCCGCTTC TTGCGACGGC GTTCGGCATC
GGAGCGATCC TCGTACTCTC ACTGGCCGTT CCGCTTGGTG GCCTTGCAGA TCTCACGGCG
CGCTTCACCC TTGTTGTTTT CGCAATCGTG AATATCGCGC TGATCCGGAT TAAGGGCAGA
CGACAGCCGG CGCCATCTGG GGCGTTCATT TGCCCGATGT GGGTGCCCTG CTTCGGCCTC
GCCTCGAGCC TCCTGCTTCT CGTCGTCGAT CTTGTGGCAT GA
 
Protein sequence
MSIEAAGSPA ESQRLLRSLS LTQAVLYGLG VTIGAGIYVL VGIAAARSGM HAPLAFIGAA 
LVMAFSAASF AELGTRMPVS ASEAAYVQAA FGRKWLSLGV GLLVVATATI SAATISVGSS
GYVAVFLPIS APWIISGVVL AMGVVACLAT AQSVTFAGIM TVVEVGGLVL IIVTGLGHGT
DVVTRLPEMW PPTRDTEAWI GLGGTALIAV FSFIGFEHVV NIAEEMKEPS RTLPRALFLT
LGLTALIYAL VVWIAVTAVP PQELARSSAP LALVFERLTG LPLVTMSAIA IVATLNGIIV
HMIMIGRVIY GLADQGNLPR VFARLNSVTQ TPLLATAFGI GAILVLSLAV PLGGLADLTA
RFTLVVFAIV NIALIRIKGR RQPAPSGAFI CPMWVPCFGL ASSLLLLVVD LVA