| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3637 |
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| Symbol | |
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| ID | 5153314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3803956 |
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| End bp | 3805896 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640558483 |
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| Product | putative sigma-54-dependent transcriptional regulator |
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| Protein accession | YP_001239629 |
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| Protein GI | 148255044 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.772793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAAC GCGACGTACG GGCCGCATGG CAAAAATTCG TCGAGCGCGG CACCTTGTCG
GGCGACGTGA GGTCGACAGT GGCCGCTTCG TGGCAGCGGT CGCGGCAGCA CAGCGTCACG
GTCGATCGGG CGAAGGCGCC GCTCGTCGCC GAGGCTGAAT TGTTTCGCCA GCGCGCCAAG
CACGCGGCGC TTCGCCAGGC CGCGCGTTGC GCGCTGCAGA ACTCCAGGAC GTTCCTGAGC
GACGCCGGCT CGATCATGAT CCTCACTGAT CCCACCGGCC TGATCATCGA CACCCAGGGC
GATGCCAGGG TCATCGATGC CGGTCGCGCA GTGCATCTCG AGCACGGCGG GCGCTGGAGC
GAGGCCGACA TCGGCACCAA CGCAATCGGC GCGGCGCTGG CCGACTCGTG CCCGGTGCAG
ATTCACGGCG CCGAGCATTT CTGCACCGAG GTCCAGCGCT GGACCTGCGC CGCCGTCCCG
GTTCACGATC CGAGCGATGG CGAGCTGCTC GGCGTCGTCG ACATCTCCGG TCCCGCCAGC
ACGTTCAATC CGCAGAGCCT GGCGCTGGCG GTGGCGGTCG GCCATCACGT CGAGAGCGTG
CTGGCGCAGC TGGCGCGGCA GGACAAGGAG CAGCTGCTGT GCGACTTCAT CGCCAAGCGC
GCGTCCTGGG CGACCGAGGA ATGCATCCTG CTCGACCGCC GCGGCGCCAT CCTGCATGCG
ACCGAGCGCG GGCTGCGCGC CATGAAGGAC AACGGTCTCA ACACCGACGG CGACGCACCG
ACGCGGTTCC TGAAGACGGT CGCGTTCGAG GACTGGCCGG CGAAGCTCAA GGAGATCCTG
CCGCATGCGA GCTTCGAGCT GGTCAAGAAC GGCAGCACGG GTGTCGGCGC GATCGTCGTG
ATGCACACCC GCCGCCGCGC CCCCGGAGAG CGCGGTGCGG TGGCCATCCG CGGGCGCGAC
GCCGCGCTTC CGGCGGCGCC GTCGCACCAC GCGCAGGCCT CTCAGCCGCC GGCGACGTCA
GCCGGGAACA AGAGGCCCCG ATTTGTTGCC GAAGACCCGA ACGTGCTCGC GATCGTCCGG
CGCGTGGAGA GCGCGGCGGC GCGCAAGATG CCGATCCTGA TCCGCGGTGA GACCGGAACC
GGCAAGGAGC AGCTGGCGCG CCATGCCCAC GCTGCCAGCC GCCGTTCCGG CGCCTTCGTC
GCGGTCAATT GCGCCGCCCT CCCCGACAGC CTGATCGAGG CCGAACTGTT CGGCTATGCC
GATGGCGCGT TCACGGGCGC GCGGTCCGGC GGCGCCATTG GTCTGGTCAA GGAGGCCGAT
GGCGGCACGC TGTTTCTCGA CGAGATCGGC GACATGCCGG TTGCGCTGCA GGGCGTACTG
CTGCGCCTGC TCGATGACTG GACGGTGCGG CCGGTCGGCG GCAGCGCGTT CAAGGTCGAC
GTCTTCCTGG TGTCGGCGAC CAACGCTGCG CTGGACAAGG CGATCGCCGA GGGACGCTTT
CGGTCCGACC TGCTCTATCG GCTCAACACG CTCGAGGTGC GGCTGCCGCG GCTGCGCGAG
CGCTGCGATT TCGACGCCAT TGCGCGGCAG CTGCTGCACA AGATCGATCC GGGCTGCGAC
ATCACGGCGG AGGCGCTGGC GCGGCTGGCG TCGAACCATT GGCACGGCAA CATCCGCGAG
CTCGGCAACA TGCTGGCGCG GCTCACGCTC GGTGTCTCCA ACGGGCTGAT CGACGAGGCC
TGCGTCGATG CCATGATCGG CCACGTCATC GGTCAAGTGA TCGCGCGGCC GCCGCAGGAC
ACAGGATCGC TGCACGACGT CCAGCGCGCC CGCATCCTGA TGGTCTATGC GGAGACCAAT
GGCAATGTCA GCGAAACCGC GCGCCGTCTC GGCGTGTCCA GGAACACGAT CTATCGCGCG
CTCGGCCAGC CGCGGCCATA A
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| Protein sequence | MDQRDVRAAW QKFVERGTLS GDVRSTVAAS WQRSRQHSVT VDRAKAPLVA EAELFRQRAK
HAALRQAARC ALQNSRTFLS DAGSIMILTD PTGLIIDTQG DARVIDAGRA VHLEHGGRWS
EADIGTNAIG AALADSCPVQ IHGAEHFCTE VQRWTCAAVP VHDPSDGELL GVVDISGPAS
TFNPQSLALA VAVGHHVESV LAQLARQDKE QLLCDFIAKR ASWATEECIL LDRRGAILHA
TERGLRAMKD NGLNTDGDAP TRFLKTVAFE DWPAKLKEIL PHASFELVKN GSTGVGAIVV
MHTRRRAPGE RGAVAIRGRD AALPAAPSHH AQASQPPATS AGNKRPRFVA EDPNVLAIVR
RVESAAARKM PILIRGETGT GKEQLARHAH AASRRSGAFV AVNCAALPDS LIEAELFGYA
DGAFTGARSG GAIGLVKEAD GGTLFLDEIG DMPVALQGVL LRLLDDWTVR PVGGSAFKVD
VFLVSATNAA LDKAIAEGRF RSDLLYRLNT LEVRLPRLRE RCDFDAIARQ LLHKIDPGCD
ITAEALARLA SNHWHGNIRE LGNMLARLTL GVSNGLIDEA CVDAMIGHVI GQVIARPPQD
TGSLHDVQRA RILMVYAETN GNVSETARRL GVSRNTIYRA LGQPRP
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