| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3608 |
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| Symbol | |
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| ID | 5153264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3776100 |
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| End bp | 3777587 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640558457 |
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| Product | putative multidrug efflux protein |
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| Protein accession | YP_001239603 |
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| Protein GI | 148255018 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0284935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC AACGCGTCAT TCCGCTGATC GTCGCCACTG CCCTGTTCAT GGAGAACATG
GACTCCACGG TCATCGCGAC CTCGCTGCCG GCGATCGCCA GGGACATCGG CACCAGCCCG
CTGACGCTGA AGCTCGCCAT CACCTCCTAT CTGCTGTCGC TCGCCGTGTT CATCCCGGCG
AGCGGCTGGA CCGCCGACCG TTTTGGCGCG CGGCGGGTGT TCTCGAGCGC CGTCGCCGTG
TTCATGATCG GCTCGATCGG CTGCGCGCTG GCGAACTCGG TCGAGAACTT CGTGTTCGCG
CGCATCCTGC AGGGCATGGG CGGCGCGATG ATGACGCCGG TCGGCCGGCT CGTGCTCTTG
CGCTCGGTCG ACAAGAGCGC GCTGGTCGGC GCCATGGCCT GGGTCACCAT CCCCGCGCTG
ATCGGCCCGG TCATCGGGCC GCCGGTCGGC GGCTTCATCA CCACCTATTT CTCCTGGCAC
TGGATCTTCC TGATCAACAT TCCGATCGGC ATCGTCGGCA TCATCATGGC GCTGCGCTTC
ATCGATCCGA TCAAGAGCGA CAATCCCGAG CCGTTCGATC TCTATGGCAT GGTGCTCGCC
GGCCTTGGCC TCGCCGGTCT CGCCTTCGGC CTCTCGGTCG CGGGTCTCAA TTTGCTGCCC
TGGTCGGTGG TGGCGAGCCT GGTCGCGATC GGCGCGATCT CGATGACGCT CTACGTCCGC
CACTCCTGGC GGACCAATTC GCCGGTGCTC GACTTCTCGC TGCTGCGGCT GCCGACCTTG
CGGGCCTCGA TCGTCGGCGG CTTCATGTTC CGGCTGGGGA TCGGCGCCCT GCCCTTCCTG
CTGCCGCTGC TGATGCAGCT CGGCTTCGGC CTGTCGCCGT TCCAGTCGGG CCTCGTCACC
TTTGGCTCCT CGGCTGGCGC GATGGGCATG AAGGCCTTGG CCGCGCGCCT CATCCGCGCC
TTCGGCTTCC GCCACCTGAT GACCGTCAAC GCGGTCGTCA GCTCGGTCTT CCTGGCCGCC
TGCGCGCTGT TCACGCCGGC GACGCCGCTG CTCCTGATCG TCATCATCTT GTTTGTCGGC
GGCTTCTTCC GCTCGCTGCA GTTCACCGCG ATCAACACCG TGGCCTATGC CGAGGTCGAG
ACCGCGCAGA TGAGCCGCGC CACCACGCTG ACCAGCGTCA ACCAGCAGCT CGCGATCTCG
GCCGGCGTCG CCGTCGGCGC GTTCTCGGTG GAGACCACGA TGTGGGCGCA TGGCGCGAGC
CAGCTGACCG CCACCTCTTT CGCGCCGGCC TTCATCGTCG TCGCCATCAC CTCGGCGCTG
TCGTCGTTCT TCTTCTGGCA GATGCCCGAC GATGCCGGCA GCGAGATCTC GGGCCGCAAG
GTCGCGGCCA TCGCCAGCCG CAAGGGCGCC GAGAAAGGGG TGGAGAAGGC AGCGACCAAA
TCGGCCAGCG AAACCACGCA TGACGCGCGG GATCAGCGGC TGGGTTAG
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| Protein sequence | MNKQRVIPLI VATALFMENM DSTVIATSLP AIARDIGTSP LTLKLAITSY LLSLAVFIPA
SGWTADRFGA RRVFSSAVAV FMIGSIGCAL ANSVENFVFA RILQGMGGAM MTPVGRLVLL
RSVDKSALVG AMAWVTIPAL IGPVIGPPVG GFITTYFSWH WIFLINIPIG IVGIIMALRF
IDPIKSDNPE PFDLYGMVLA GLGLAGLAFG LSVAGLNLLP WSVVASLVAI GAISMTLYVR
HSWRTNSPVL DFSLLRLPTL RASIVGGFMF RLGIGALPFL LPLLMQLGFG LSPFQSGLVT
FGSSAGAMGM KALAARLIRA FGFRHLMTVN AVVSSVFLAA CALFTPATPL LLIVIILFVG
GFFRSLQFTA INTVAYAEVE TAQMSRATTL TSVNQQLAIS AGVAVGAFSV ETTMWAHGAS
QLTATSFAPA FIVVAITSAL SSFFFWQMPD DAGSEISGRK VAAIASRKGA EKGVEKAATK
SASETTHDAR DQRLG
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