Gene BBta_3605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3605 
Symbol 
ID5152829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3771520 
End bp3773496 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content66% 
IMG OID640558454 
Productglycosyltransferase 
Protein accessionYP_001239600 
Protein GI148255015 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0354405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCAC TTCCCAGCGA TGCTGCGTCG GTGCTGACCA CCGACCTTGG AGTCCTGCTC 
GGGCTCCTGG CGATGGCCAG GCTGCTCGAC CCGACGCGAT GGCGCGATCG CGCCCTGTTG
GGAGCGACGA CGGCCACGTT CCTGCTGATC TACACGCTGT GGCGCTGGAA CGACACGCTG
CCGAGCTTCG ATCTCACCTT GCAGGCGTTG TGGCCGCGTC TCTTCATCAC GCTCGAGATC
ATCGCGATCT CCTATACGCT GATGTCAATC CTGATCCTCA CCCGCAGCGT CGACCGCTCG
GCGCAGGCCG ATGCCGCGCG TCGCGCGCTG GCGGCGCGGG GCGAGCAGCC GGCCGTCGAT
GTCTTCATCT GCACCTATGA TGAGCCGATG GAGATCGTCG AGCGCTCGAT CCTGGCGGCG
CTGGCGCTCG ACTATCCCGA CAAGACCGTC TGGGTGCTCG ACGACACCCG TCGCGACTGG
CTGCGCGCCT TCTGCGATGA GGTCGGCGCG CGCCATTTGA CCCGGCCCGA CAACAAGGGC
GCCAAGGCCG GCAATCTCAA CAACGCGTTG GCAGCGACCG CGCGTCTCTC CAATGCACCG
GTGATCCTGG TGCTCGATGC CGATTTCGCG CCGCGGCGCG ACTTCCTCCA GCGCACCGTC
GGCTTGCTGC TCTCCGAGCC CGATATCGCG GTCGTGCAGA CGCCGCAATT CTATTACAAT
CCCGATCCGA TCCAGCACAA TCTGCTCTCG TCCAGCAGTT GGGTCGACGA TCAGCGCTTC
TTTTTCGACG TGTTCCAGCC GGCCAAGGAT GCCTGGGGTT GCGCGTTCTG CGTCGGCACA
TCCTTTGTCG TGCGCCGCGA GCGGCTCGCC GAGATCGGCG GCTTCCCCCA TGCGGCGATC
TCGGAAGACC TCAATCTCAC CTACACGCTG CTGAGGCGCG GTCAGCGCAC GGTCTGGCTC
AACGAGCCGC TCAGCTTCGG TCTCTCGGCG GAGGGCGTGC CGGAATACAT CACCCAGCGC
GCGCGCTGGT GCCTCGGCAC GATCCAGGTC GCGCTGCTGC GCGACGGACC GCTGCGCAGC
CGCGGCTACA GCTTCACCCA GCGCTGGCAT TTTCTGCATG GCGTGCTGAA CTGGCTGTGC
AAGCCGTTCA TGGTGCTGCT GCTGATCGCG CCGCCGATCT ACTGGTTCGC AGGCCTGCCG
GCCTTCGCGG CAGACTATCT CTCGTTCCTG CGTTACGGCG TGCCGGCACT GCTCGGCACG
ATCATCTATA TGGGCTGGAT TTCGCGGGCG CGCACCTTGC CGCTGTTCAT GGAGGCGACG
CATGCGGTGA CCTGCTTTGC CGTCACGGCC ACCTTGCTCA GCGCGCTGAT CCGGCCGTTC
GGCCGCCCTT TCAAGGTCAC TGACAAAGGT GGCGACCGCT CCCGGCCGCG GGTCCACGCC
AAGCTGGCGA CACTCTTCGG GCTCATCGCC GCAAGCTCGG CGGCCAGCAT CGTCTGGGCT
TTCATATCGC CGACAGCCGC CAGCGAGATC TCGTCGATCG ACTATTTCAA CCTGATGTGG
GCTGGCATTG CCATGCTGAT CGCCTTCATC GCATTCCTGG TCTGCTTCGA GTTGCCGCGG
GGCGAGGATC TATTCCCAAG CGGTGAAGCC GGCTGGCTCG CGAAGGACAA TGAAGTCGTG
CCGTGCCGCA TCGAGGCCTT GTCGCTGTCG TCGGCACGGG TCGCCGGCCT GCGCCATCAG
CGCCTGACCA CGCCCGGAAG CCGATTGCCG CTGCATCTCG ATGGTCTCGG ATGGATCGAG
GCGTCGGTGA GCGCCGTCTC CAAGACGACG ATGCATCTCC GTCTCCAGCC GTCCGAAGCG
CAGCGGCGGC AGTTGGTGCT TCGCCTGTTC AGTTCCTCCT GCGGCGTCAT CACCGGCCGC
GCGCGCCTGC GTGGTGCACT GGCCGGGCTG GCGCGACGCG GCTTCGCCGG GCGGTGA
 
Protein sequence
MFPLPSDAAS VLTTDLGVLL GLLAMARLLD PTRWRDRALL GATTATFLLI YTLWRWNDTL 
PSFDLTLQAL WPRLFITLEI IAISYTLMSI LILTRSVDRS AQADAARRAL AARGEQPAVD
VFICTYDEPM EIVERSILAA LALDYPDKTV WVLDDTRRDW LRAFCDEVGA RHLTRPDNKG
AKAGNLNNAL AATARLSNAP VILVLDADFA PRRDFLQRTV GLLLSEPDIA VVQTPQFYYN
PDPIQHNLLS SSSWVDDQRF FFDVFQPAKD AWGCAFCVGT SFVVRRERLA EIGGFPHAAI
SEDLNLTYTL LRRGQRTVWL NEPLSFGLSA EGVPEYITQR ARWCLGTIQV ALLRDGPLRS
RGYSFTQRWH FLHGVLNWLC KPFMVLLLIA PPIYWFAGLP AFAADYLSFL RYGVPALLGT
IIYMGWISRA RTLPLFMEAT HAVTCFAVTA TLLSALIRPF GRPFKVTDKG GDRSRPRVHA
KLATLFGLIA ASSAASIVWA FISPTAASEI SSIDYFNLMW AGIAMLIAFI AFLVCFELPR
GEDLFPSGEA GWLAKDNEVV PCRIEALSLS SARVAGLRHQ RLTTPGSRLP LHLDGLGWIE
ASVSAVSKTT MHLRLQPSEA QRRQLVLRLF SSSCGVITGR ARLRGALAGL ARRGFAGR