Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3605 |
Symbol | |
ID | 5152829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3771520 |
End bp | 3773496 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640558454 |
Product | glycosyltransferase |
Protein accession | YP_001239600 |
Protein GI | 148255015 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0354405 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCCAC TTCCCAGCGA TGCTGCGTCG GTGCTGACCA CCGACCTTGG AGTCCTGCTC GGGCTCCTGG CGATGGCCAG GCTGCTCGAC CCGACGCGAT GGCGCGATCG CGCCCTGTTG GGAGCGACGA CGGCCACGTT CCTGCTGATC TACACGCTGT GGCGCTGGAA CGACACGCTG CCGAGCTTCG ATCTCACCTT GCAGGCGTTG TGGCCGCGTC TCTTCATCAC GCTCGAGATC ATCGCGATCT CCTATACGCT GATGTCAATC CTGATCCTCA CCCGCAGCGT CGACCGCTCG GCGCAGGCCG ATGCCGCGCG TCGCGCGCTG GCGGCGCGGG GCGAGCAGCC GGCCGTCGAT GTCTTCATCT GCACCTATGA TGAGCCGATG GAGATCGTCG AGCGCTCGAT CCTGGCGGCG CTGGCGCTCG ACTATCCCGA CAAGACCGTC TGGGTGCTCG ACGACACCCG TCGCGACTGG CTGCGCGCCT TCTGCGATGA GGTCGGCGCG CGCCATTTGA CCCGGCCCGA CAACAAGGGC GCCAAGGCCG GCAATCTCAA CAACGCGTTG GCAGCGACCG CGCGTCTCTC CAATGCACCG GTGATCCTGG TGCTCGATGC CGATTTCGCG CCGCGGCGCG ACTTCCTCCA GCGCACCGTC GGCTTGCTGC TCTCCGAGCC CGATATCGCG GTCGTGCAGA CGCCGCAATT CTATTACAAT CCCGATCCGA TCCAGCACAA TCTGCTCTCG TCCAGCAGTT GGGTCGACGA TCAGCGCTTC TTTTTCGACG TGTTCCAGCC GGCCAAGGAT GCCTGGGGTT GCGCGTTCTG CGTCGGCACA TCCTTTGTCG TGCGCCGCGA GCGGCTCGCC GAGATCGGCG GCTTCCCCCA TGCGGCGATC TCGGAAGACC TCAATCTCAC CTACACGCTG CTGAGGCGCG GTCAGCGCAC GGTCTGGCTC AACGAGCCGC TCAGCTTCGG TCTCTCGGCG GAGGGCGTGC CGGAATACAT CACCCAGCGC GCGCGCTGGT GCCTCGGCAC GATCCAGGTC GCGCTGCTGC GCGACGGACC GCTGCGCAGC CGCGGCTACA GCTTCACCCA GCGCTGGCAT TTTCTGCATG GCGTGCTGAA CTGGCTGTGC AAGCCGTTCA TGGTGCTGCT GCTGATCGCG CCGCCGATCT ACTGGTTCGC AGGCCTGCCG GCCTTCGCGG CAGACTATCT CTCGTTCCTG CGTTACGGCG TGCCGGCACT GCTCGGCACG ATCATCTATA TGGGCTGGAT TTCGCGGGCG CGCACCTTGC CGCTGTTCAT GGAGGCGACG CATGCGGTGA CCTGCTTTGC CGTCACGGCC ACCTTGCTCA GCGCGCTGAT CCGGCCGTTC GGCCGCCCTT TCAAGGTCAC TGACAAAGGT GGCGACCGCT CCCGGCCGCG GGTCCACGCC AAGCTGGCGA CACTCTTCGG GCTCATCGCC GCAAGCTCGG CGGCCAGCAT CGTCTGGGCT TTCATATCGC CGACAGCCGC CAGCGAGATC TCGTCGATCG ACTATTTCAA CCTGATGTGG GCTGGCATTG CCATGCTGAT CGCCTTCATC GCATTCCTGG TCTGCTTCGA GTTGCCGCGG GGCGAGGATC TATTCCCAAG CGGTGAAGCC GGCTGGCTCG CGAAGGACAA TGAAGTCGTG CCGTGCCGCA TCGAGGCCTT GTCGCTGTCG TCGGCACGGG TCGCCGGCCT GCGCCATCAG CGCCTGACCA CGCCCGGAAG CCGATTGCCG CTGCATCTCG ATGGTCTCGG ATGGATCGAG GCGTCGGTGA GCGCCGTCTC CAAGACGACG ATGCATCTCC GTCTCCAGCC GTCCGAAGCG CAGCGGCGGC AGTTGGTGCT TCGCCTGTTC AGTTCCTCCT GCGGCGTCAT CACCGGCCGC GCGCGCCTGC GTGGTGCACT GGCCGGGCTG GCGCGACGCG GCTTCGCCGG GCGGTGA
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Protein sequence | MFPLPSDAAS VLTTDLGVLL GLLAMARLLD PTRWRDRALL GATTATFLLI YTLWRWNDTL PSFDLTLQAL WPRLFITLEI IAISYTLMSI LILTRSVDRS AQADAARRAL AARGEQPAVD VFICTYDEPM EIVERSILAA LALDYPDKTV WVLDDTRRDW LRAFCDEVGA RHLTRPDNKG AKAGNLNNAL AATARLSNAP VILVLDADFA PRRDFLQRTV GLLLSEPDIA VVQTPQFYYN PDPIQHNLLS SSSWVDDQRF FFDVFQPAKD AWGCAFCVGT SFVVRRERLA EIGGFPHAAI SEDLNLTYTL LRRGQRTVWL NEPLSFGLSA EGVPEYITQR ARWCLGTIQV ALLRDGPLRS RGYSFTQRWH FLHGVLNWLC KPFMVLLLIA PPIYWFAGLP AFAADYLSFL RYGVPALLGT IIYMGWISRA RTLPLFMEAT HAVTCFAVTA TLLSALIRPF GRPFKVTDKG GDRSRPRVHA KLATLFGLIA ASSAASIVWA FISPTAASEI SSIDYFNLMW AGIAMLIAFI AFLVCFELPR GEDLFPSGEA GWLAKDNEVV PCRIEALSLS SARVAGLRHQ RLTTPGSRLP LHLDGLGWIE ASVSAVSKTT MHLRLQPSEA QRRQLVLRLF SSSCGVITGR ARLRGALAGL ARRGFAGR
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