Gene BBta_3590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3590 
Symbol 
ID5150476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3753891 
End bp3754970 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content67% 
IMG OID640558439 
Productputative amino acid processing enzyme-related protein (aldolase or racemase) 
Protein accessionYP_001239585 
Protein GI148255000 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00954952 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACGC CGCTCGCCGC CAGGATCGCC AGGGAATACG GCACCCCGTG CGCCGTCATC 
GACATGGACA GGGTCGAGCG CAACATCGCG CGCATCCAGG CGCAGTGCGC GGCGGCCGGC
GTCGCCAATC GTCCCCACAT CAAGACGCAC AAGAGCCCTG AACTGGCCAA GCTGCAGATC
GCGGCCGGCG CCCAAGGCAT CACCTGCCAG AAGATCGGCG AGGCCGAGAT TATGGCTGAG
GCCGGCATCG ACAACGTCCT GATCAGCTAC AATCTGATTG GCGAGGAGAA GATGGCGCGG
CTCGCCGCGC TGCAGGCCAA GGCCGACATG ACGGTCGCCG CCGACAATCC GGTCGTCGTC
GCCGGCCTGC CGGAGGCGGC GAAGCAATCC GGTCGCACGC TCTCCGTCGT GGTCGAATGC
GACACCGGGC GCAAGCGCGC TGGTGTTGAA ACGCCGGCCG AGGCGATTCA GCTCGCGCGC
CAGATCAAGG TGTCAGAGGG CCTGCGCTTC GCCGGCTTCA TGCTGTATCC GACCGAGACG
GGCTGGGACG AGGCGCAACG CTTCTTTGAC GAGGCGCTCG CCGGCGTGCG CGCCGAAGGG
CTGGACGCGG CCATCGTCTC GACCGGCGGC TCGCCCAACC TGAAAAATCT CGGCAAGCTC
AAGGGCGCCA CCGAGCACCG GCCCGGAACC TACATCTACA ACGACCGCAT GCAGGTCGCC
GCCGGCGTTG CGACCTGGGA CGACTGCGCG CTGCATATCT ACTCGACCGT CGTCAGCCGT
GCCGCGCCCG AGCGCGGCAT CCTCGATGCC GGCTCGAAGA CGCTGACATC CGATACTGGA
GGCCTCGACG GCCATGGCCT GATCCTGGAG CACCCGGAGG CCAAGATCGC CCGCTTCGCC
GAGGAGCACG GATTCCTCGA TCTGTCGCGC TCCAACACCC GCCCCCATGT CGGCGACGTC
GTCCGCATCG TCCCCAACCA TGTCTGCGTC GTCGTCAACA TGATGGACGA GGTCGTGATG
GTCCGCGGCG ACGAGATCCT GGGAACGCTG CCGGTCGCGG CCAGGGGCAA GCTGCGCTAG
 
Protein sequence
MTTPLAARIA REYGTPCAVI DMDRVERNIA RIQAQCAAAG VANRPHIKTH KSPELAKLQI 
AAGAQGITCQ KIGEAEIMAE AGIDNVLISY NLIGEEKMAR LAALQAKADM TVAADNPVVV
AGLPEAAKQS GRTLSVVVEC DTGRKRAGVE TPAEAIQLAR QIKVSEGLRF AGFMLYPTET
GWDEAQRFFD EALAGVRAEG LDAAIVSTGG SPNLKNLGKL KGATEHRPGT YIYNDRMQVA
AGVATWDDCA LHIYSTVVSR AAPERGILDA GSKTLTSDTG GLDGHGLILE HPEAKIARFA
EEHGFLDLSR SNTRPHVGDV VRIVPNHVCV VVNMMDEVVM VRGDEILGTL PVAARGKLR