Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3589 |
Symbol | |
ID | 5150475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3752220 |
End bp | 3753878 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640558438 |
Product | hypothetical protein |
Protein accession | YP_001239584 |
Protein GI | 148254999 |
COG category | [S] Function unknown |
COG ID | [COG5338] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0075093 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGCGTTTTC ATGCGCAGAT GCGCCGAGCG CGTCTGCCTG ATGCGTTGCC CGAGTTTGTT GTGAGACATG CGAAAGCGTC AGCTTTGGTT CGGGCGATGG AGATCACGCG GCGATTGCTT GGCGCGGCTT GCCGCATCGT GTTGCATTGT CTGCTGCTCA CCATCACCCT CTCGGTCGAC CGTGCGGAAG CCGCCGTCAG GGCTGAAACA TTGCTGTTGC GCCCGGTCGC CGACGCAGAC CCGTTGTTGT TGCGGCGGTT CAAGGCGATC GATCCGCGGG AGAGCCTGGC GCGAGCCGTC CGCTTTGCCC CGGCCGCGGC GAAGCCGTTG CCCTTGCCGG GCGCGATGCT CGAGGGCACA GGATGCCTTG CCTTGATGCG GGTGCCCCCC AATGATGCAA CTCGGATCTG GCGCGCGCTG GTCCGTTGTC ACGTCAAGAG CCGGCCTATC GGACCCAAGC GGCCGGTCGC GCCGGTCATG CCGAAGCTGG AGGAGGTCGC GGAGGCGCCC AAGCCGGAGG AGAAGGCCGA GGAGGACGAT CCCTTCGAAC CGAAGGGAAT CAAGGTCGGG GCCTTTGTGA TCAAGCCGGC ACTGGAACTG ACCGTCGGGG TCGACTCCAA TCCGTTGCGG ATGCCGCGGG GCGGCAGGCC CGCGCAGACG CGCTCTGTCG TCCACGAGCT CGAAATACGT TCGCAATTCG AGCGGCACGA GCTCAATGCG GATCTGAGCG TCGGTTACAG CCAGACGCAA GGCGTGCCCG TGCTCAACGC CCCGGCGGTC GATGCGAAGA TCGATGGCCG CTACGACATC ACCGACGATC GATCGATCAA TGGCGAGGTC CGGTATGCGC TCGATCCCGT CGACCGGGTG CTCGAAGCCC CCAGAGGCAC CTTCGTCTCT AAATCCGGAG CGACGGTGGG CGTGAGCCAG AAGCTCGACA ATGTCAGCGT CTCGGTGAAG GGGCTGGTCG ATCGGAGCAC CTTCAGCGGC GCACGCCCCG GCGATGACGC GCCGATCCCG AACAAGGACC GCAATTTCAC CCAGCCTGCG GTGCAGACGC GCGTGTCTTA CGCATTGTCG CCGCAGATCA GTCCGTTCGT CGACGTGACG CTGGACCGCA GGGTGCACGA CATCCCGGTG GATTTCGGCG GCGTCCGCCG CGATTCCAAT GGCACCGTGG TCAGTGCCGG ACTGAGCCTG GCCTTTGCTG GACGATTGGC CGGCGAGATC GCGGTCGGAT ATCTGACGCG GCGTTTTGCC GACCCGATGC TGCCCGGGAT TTCCGGCATG ATCGTGAACG GGGCGCTCGT CTATCGGCCA TTCGACAGGA CGTCATTCGT CCTGGTCGGA ACGTCCGACA CTCTGGAGAG CGTCATACCG GGCGTGAGCG GGATCTTTCG GCGGGACCTG ATCCTGCAGG CGCGCCAGGA ATTCGATCCC CGCACCAGTG CCTCGCTGTC CTTCGGCTTT GGTCAGGACC GGTTCGCGGG CATTGTCCGG ACCGACGATC GATACTCCGT TGCGCTTGGC GCCGTCTACA AGCTGTCGCG TGAAGTGCAG CTCAAGGCCG ACGTCCGGCA GGATTGGTTG AGATCGACAA TCCCCACCGT CAACAACATG GCGACGACGG CGACGGTGGG AATCCGATTC CAATACTGA
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Protein sequence | MRFHAQMRRA RLPDALPEFV VRHAKASALV RAMEITRRLL GAACRIVLHC LLLTITLSVD RAEAAVRAET LLLRPVADAD PLLLRRFKAI DPRESLARAV RFAPAAAKPL PLPGAMLEGT GCLALMRVPP NDATRIWRAL VRCHVKSRPI GPKRPVAPVM PKLEEVAEAP KPEEKAEEDD PFEPKGIKVG AFVIKPALEL TVGVDSNPLR MPRGGRPAQT RSVVHELEIR SQFERHELNA DLSVGYSQTQ GVPVLNAPAV DAKIDGRYDI TDDRSINGEV RYALDPVDRV LEAPRGTFVS KSGATVGVSQ KLDNVSVSVK GLVDRSTFSG ARPGDDAPIP NKDRNFTQPA VQTRVSYALS PQISPFVDVT LDRRVHDIPV DFGGVRRDSN GTVVSAGLSL AFAGRLAGEI AVGYLTRRFA DPMLPGISGM IVNGALVYRP FDRTSFVLVG TSDTLESVIP GVSGIFRRDL ILQARQEFDP RTSASLSFGF GQDRFAGIVR TDDRYSVALG AVYKLSREVQ LKADVRQDWL RSTIPTVNNM ATTATVGIRF QY
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