| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3587 |
|---|
| Symbol | |
|---|
| ID | 5151957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3747520 |
|---|
| End bp | 3750888 |
|---|
| Gene Length | 3369 bp |
|---|
| Protein Length | 1122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640558437 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001239583 |
|---|
| Protein GI | 148254998 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.479804 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0414977 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTGC TGCTGGAGGC CGCACTGCGA TCGTTTGGCC TCGGGGCGGC AGTCTGGATC
GGTCTGCGGC TGGTCAGAGT CGTCAATCCG CGGATCGAGT TGCGGGTGTG GGTCTGCGTG
ATGCTGGCCT CGACCGCGAT GCCTGCGCTG GTCGGGTCGA GTCTGGTCAC GCTCACGCTG
CACGAAGATC CTCCCGCGGC GGCGATCCCG CTGCCAGGCG CGCCGGACGA GCAGCCAATG
GCCCGTAGTT TGCGGTCGGG CTCGGCCGGC GCCGCGCGCG TTGCCGCGGC TGTCGATCAA
AGCGGTTCGG CTCGCGAAAT CGGCCAGGCC GACACCAACC GCGGTGTGGG TGCCGCGACG
TCCTCGTCGT CTGCCGCGCC GGGCGTCGGC GCGCAACTCT CTGCTTGGCG TCCGAACTGG
CGCGGACTTG TCTTCTATCT CTATGTCACT GTGGCCGCCG TGCTGCTGCT GCGGATCAGT
CTGGGCATTC TGTTCGCGGT CAGGCTGTGG CGGTCGGCGG AGATCGTTCA TGAGCCGCTT
GCCGGCGGCG ATGTGCGCGT CAGCCCCGCC GTCAGATCGC CGGTGACGTT TGCCGGCAGC
GTCCTGCTGC CTTTGGAATA CCGCGACTGG GAGCCCGTCA AACTAATCGC GGTGCTCGGG
CACGAGCATT CCCATGTCCG CCATCTGGAT TTCTACACGC TGTTGTTTGC GACCTTGCAC
CGCGCGGTGT TCTGGATCAA TCCGCTCGCC TGGTATCTCT GCTACAGGGT CGCGGCCTTG
GCAGAGATGC GAAGCGACGA CGAGGCGATC GAAGGCATCG GCGATCGCCT GGCCTATGCG
GAAGTGCTGC TCGGGGTGGC CAGCAACCCG GCGCCGCCAC CTCATGGCAT GGTCGCCCTG
ATGCATGCGA TCGTTGCCCA ACGGATCGAG CGGATCCTGG ATTCCGACTG CGTTTCGGAA
CGGCCCGCAT TGCGCAAACG CATCGCCATT TATGGCGCCT GTTGCACCCT CATTCTGCTG
AGTGCAGGCA GGATCGGCTA CGGCTATCTG CCGCTGGACG TCAGCTGGGA CGAGTTCACG
GCCCGCAGGA CCTCGGGGGC CGTGCGGGCC GTGATGGTCC CCCCCGAGCA GCTCGACAGC
TATGTCGGCT ACTATCAGGC CGATCCGGCG GTCCTGCCCG ACCTGGTGTT GACCGTGACG
CGCGACAAGC AGCATCTGTT CGTGCAACGT ACCGGCCAGA ACAAGATCGA AGTGCTGCCG
GAGAGCGAAC GCGATTTCTT CTACACCGAT CGAAGCTTCG AACTGTCCTT CATCGGCCGG
GCGGGGGCGC GCGCCATTGC CATGGTACTG CATCAGAACG GCACGCATAT CCGTGCGTCG
CGGGTCTCGG CGGACGTCGC CCGCCGTGCG GCCGACCTGC TCGAGCAGCG TCTCATTGAA
CAGGCGCGAA CGCGCAGTCC AGCCAGGATT GACCCGGCTG CCTTCGACCG CCTGGTCGGA
TATTATCGTG AGAATCCGCG GCTCCACGTC GAAATCAGCC GAGATGGCGA TCGGCTGTTC
GGCCGATACA GCGGCAGCCG CAAAATGGAG CTGTTTGCCG AAGACGATCT GCACTTCTTC
TTCAAGGATA TTGATGCACA GATCGCCTTC TTCGCCGATG CCGATGGACA CGTCAATGCG
CTGACCAGTC ACCAGGACGG CCGTCTGTGG CCTGCCCAGC GGATAGCCGC ACCGGACCGA
ACCGTGGGCC AGGTCGAGGA CGCTGCCGCG TCGCGGAATC CGGGTATCGC TCCCGAGCAG
GCCGTCATTC TCCGTGAGCC GCGATCGGCC GAGACGATCG CAGGATTCTA CCAGGTCGAT
TCGTTCAAGA TCCTGGTCAT TTCCGCAGAG AACGGCAGGA GTTTCGCGCA GCTCGGCTAT
CAGCCGAAGG TCGAGATTGA GGCGGCCCGC GACGGCTCAT ATGGCGATGT CGGCATGTCG
CTCAGGCTTC GCTTCACGTT GGATGATGCG GGCAAAGTCT CGGGCGCGAT GCTCATTCGC
AAGGGCAAGA CGACGCGGCT ACCGCGCATC AGTGGTTTGC CGCAGTTTGC ACCGCAGGCC
TCTCGGCTCG ATGCGCGGCT GTTCGATGCC GAATACGCCG GAAACTACCA GGCGGGGTTC
GATACTTTGA TCCGAATTAC CAGAGAGGGA GACCGCCTCC GCGTCGAAAA GCCTGGTCTG
GTGACCGGAG ATGAGATCGA ACCTGTCGCC GATCGAGTGT TCCTGTGCCG GGCGACCGGC
AAGCATTTTC TGTTCATTCG GGATCCCTCG GCAAGCGCGC TGAACCTCGT GATCTTCGAG
CCGGGTGTCG GTGCAACGTT GGCCACACGG ATCGATGGCG CAACGGCGCG AGAGCTCGAA
GTGGAGCATA TTCGTCGGAC CGCGATGAGG ATCGACCGCG TTCTGGCTCA GACGGCGACG
GCCGGCAGTG AGGAGATCCT GCGTGATACG ATCGCGCAGT TGCAGCGCGG CGAGGTCGAC
TCGACGCAGC TGAAACAGAG ATTTCCGCAG GAGCTTCGGG TCAGGCTGCT CAAGGCCAAG
CGTGAGCTGC AGGCACTCGG CGTGCTTCAG CAGCTTCGGT TTGCCGGAGT CGCGGCGGAC
GGGCTGGACG TCTTCGATGC CCAGTTTGCG TGGGGGAGTG CCCGATTCAG AGTGCTCTTG
GACAGCGACC GGACCGTGAA GCGGCTGGCC TTTCGCTGGT ACGGAGACGA CACGCCGGGG
GCCTATGTGC CCTGCGGAGC TGAAATCCCC GCCGGCGAGC CCGCCGGAGC GCTGTCGATC
GACGTGACCC TGATCAATCA CAGCGAAGGA CCCGTCAACG CCTACCTGGT CGGGCCGGAT
GGCGAGCGCA GATTTCAAAG CAGTTTCGAG CCGGACACGC GTGGCGAGGT CGCGACGAAA
CTCGATCGGC CGATCGTCAT CACCGACAAG GCTGGCGATT GCATCGGAAT CGTTCTTCCA
GGCAGGGCGA CCCGTGTCAC CGAGGTGCGG GGAAGCGAGA ATGGCGCTGT CCTCGGCGCG
CCCCTGATCC ATGACACACC GGATCCGCAG AGCCAGACGC GGCTGCTGGA CTACATGGCC
GCAGTGCGCG ACGGTCGGAT CGACGAGACG ATGCTGACCC GGTCGATGGC GCGCAATGGA
CGCGAGAGGC TCGCCGTTTG GCAGCGCATG TTGACCGATC TCGGCCGGTT CGAGTCGCTT
CGCTTTATCG GTGGAGATAG TGCCGTCGGC GATCGGTTCC GCGCGCGCTT CAGCAACGGC
GAACTCGATT GGCGGATCGT CACCGCCGCA GACGGACGCA TTTCCAGCCT CGCTGTCGGC
GCTGACTAG
|
|---|
| Protein sequence | MDLLLEAALR SFGLGAAVWI GLRLVRVVNP RIELRVWVCV MLASTAMPAL VGSSLVTLTL
HEDPPAAAIP LPGAPDEQPM ARSLRSGSAG AARVAAAVDQ SGSAREIGQA DTNRGVGAAT
SSSSAAPGVG AQLSAWRPNW RGLVFYLYVT VAAVLLLRIS LGILFAVRLW RSAEIVHEPL
AGGDVRVSPA VRSPVTFAGS VLLPLEYRDW EPVKLIAVLG HEHSHVRHLD FYTLLFATLH
RAVFWINPLA WYLCYRVAAL AEMRSDDEAI EGIGDRLAYA EVLLGVASNP APPPHGMVAL
MHAIVAQRIE RILDSDCVSE RPALRKRIAI YGACCTLILL SAGRIGYGYL PLDVSWDEFT
ARRTSGAVRA VMVPPEQLDS YVGYYQADPA VLPDLVLTVT RDKQHLFVQR TGQNKIEVLP
ESERDFFYTD RSFELSFIGR AGARAIAMVL HQNGTHIRAS RVSADVARRA ADLLEQRLIE
QARTRSPARI DPAAFDRLVG YYRENPRLHV EISRDGDRLF GRYSGSRKME LFAEDDLHFF
FKDIDAQIAF FADADGHVNA LTSHQDGRLW PAQRIAAPDR TVGQVEDAAA SRNPGIAPEQ
AVILREPRSA ETIAGFYQVD SFKILVISAE NGRSFAQLGY QPKVEIEAAR DGSYGDVGMS
LRLRFTLDDA GKVSGAMLIR KGKTTRLPRI SGLPQFAPQA SRLDARLFDA EYAGNYQAGF
DTLIRITREG DRLRVEKPGL VTGDEIEPVA DRVFLCRATG KHFLFIRDPS ASALNLVIFE
PGVGATLATR IDGATARELE VEHIRRTAMR IDRVLAQTAT AGSEEILRDT IAQLQRGEVD
STQLKQRFPQ ELRVRLLKAK RELQALGVLQ QLRFAGVAAD GLDVFDAQFA WGSARFRVLL
DSDRTVKRLA FRWYGDDTPG AYVPCGAEIP AGEPAGALSI DVTLINHSEG PVNAYLVGPD
GERRFQSSFE PDTRGEVATK LDRPIVITDK AGDCIGIVLP GRATRVTEVR GSENGAVLGA
PLIHDTPDPQ SQTRLLDYMA AVRDGRIDET MLTRSMARNG RERLAVWQRM LTDLGRFESL
RFIGGDSAVG DRFRARFSNG ELDWRIVTAA DGRISSLAVG AD
|
|---|
| |