Gene BBta_3584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3584 
Symbol 
ID5151954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3744700 
End bp3745617 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content66% 
IMG OID640558434 
Productputative 3-oxo-(acyl) acyl carrier protein reductase 
Protein accessionYP_001239580 
Protein GI148254995 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.185975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCA GATTCGACGG ACGCGTCGCC ATCGTCACCG GCGCAGGCAA TGGTCTCGGG 
CGCGCGCATG CGCTGGGGCT GGCGAGCCGC GGCGCAAGGG TCGTGGTCAA TGATTTCGGC
GGCGCGCGTG ACGGCACAGG CGGCTCGTTG ACCGCGGCGG AGACGGTCGT CGAGGAGATC
CGCAAGGCCG GCGGTACCGC GATGGCCGAC GGCGCCGACG TCTCGAATTT CGAGCAGGTC
ACCGCGATGG TCGAACGCGC CACCAAGGAA TGGGGCAGCG TCGACATCAT GTGCGCCAAT
GCCGGCATCC TGCGCGACAA ATCGTTCGGC AAGATGGAGG TCGCCGATTT CGCCAAGGTG
CTGGACGTGC ATCTCGTCGG CACCTTCTAT TGCTGCAAGG CGGTGTGGAA CGGCATGCGC
GAACGCAATT ACGGCCGCAT CGTCATGACG ACGTCGTCGT CCGGCCTGTT CGGCAATTTC
GGCCAGGCCA ATTATGGCGC CGCGAAGTCG GGCATGGTCG GGCTGATGAA CGTCCTGGCG
GAAGAGGGCC GCAAGACCAA CATCCGCGTC AACATCATCT CGCCGACCGC GGCCACGCGC
ATGACCGAGG AGCTGCTGCC GCCGCAGGCG CTGCAGCTGA TGAAGCCGGA GGCGATCACC
CCGGCAGTGG AATATCTGCT CAGCGAGGAC GCCCCGACCC GCACCATCAT GGGCGCCGGT
GCGGGCTCCT TTGCGGTGAT CAAGATCCTG GAGACCGAGG GCATCAACCT GCCGCCGGAG
GAGTGGACGC CGGACGCGAT CGCCGCGCAT TTTGCCGAGA TCAGCGACAT GTCGAAGGCG
CGGGCCCTGC AGGGCGCGTT CGAGCAGACG CAGAAATATG TCGGCCAGGC CGCAGCGCGG
CTGGGGATCA AGCTGTAG
 
Protein sequence
MAIRFDGRVA IVTGAGNGLG RAHALGLASR GARVVVNDFG GARDGTGGSL TAAETVVEEI 
RKAGGTAMAD GADVSNFEQV TAMVERATKE WGSVDIMCAN AGILRDKSFG KMEVADFAKV
LDVHLVGTFY CCKAVWNGMR ERNYGRIVMT TSSSGLFGNF GQANYGAAKS GMVGLMNVLA
EEGRKTNIRV NIISPTAATR MTEELLPPQA LQLMKPEAIT PAVEYLLSED APTRTIMGAG
AGSFAVIKIL ETEGINLPPE EWTPDAIAAH FAEISDMSKA RALQGAFEQT QKYVGQAAAR
LGIKL