Gene BBta_3577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3577 
Symbol 
ID5152018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3736457 
End bp3737113 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content68% 
IMG OID640558427 
ProductTetR family transcriptional regulator 
Protein accessionYP_001239573 
Protein GI148254988 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.702591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.678944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACT CTCCGGAACA CAAGGCGGAA ACCCACGCGC GAATCGTACG CAAGGCGTCG 
GTGCGGCTCC GCGAGAAAGG GGCTCATGGG GTCGGCGTCG CCGACCTGAT GAAGGAAGCG
GGGCTGACAC ACGGCGGATT CTACGCGCAT TTCGAATCGC GCGAGGCGCT TGTCGTCGAG
GCGTTTGGTT ATGCCATGGA CCGCTCGGTG GCGCGGTGGC GCAAGCTGCT GGACGAACTG
CCGCCGCAAA AGCGGCTCGC CGCGATCGTC GACGGTTACC TTTCGCGGCA GCATCGCGAC
GACCTTGGCC ACGGCTGCGC GGTTCCCGCG CTTGGCGCCG AGATCGCGCG CGAGAGCGCC
AAGACCCGCA AGGCGTTTGC GGCGAAGCAG GAGGATCTGA TCCAGCTGTT CGCCGGATAC
ATCGTTGATG TGCCGCCCAA GATCGCCCGA AAGCGGGCGT CGGCGATGCT CGCGACCCTG
ATGGGGACGT TGGTCATGGC ACGGGTGACC GGCAGTGGGG ATGCGTCCGA CGAGATTCTC
GGCGCAGGCC GCGAGGCGGC TCTCGCCATC GCGACAGGAC TCGGTCCGGC GGGCAAGACG
TCGGCACGCC CGGCGGCGAA GCCGCGCGTG AGCAAGGCGC CCACCGCCCG AGGCTGA
 
Protein sequence
MRYSPEHKAE THARIVRKAS VRLREKGAHG VGVADLMKEA GLTHGGFYAH FESREALVVE 
AFGYAMDRSV ARWRKLLDEL PPQKRLAAIV DGYLSRQHRD DLGHGCAVPA LGAEIARESA
KTRKAFAAKQ EDLIQLFAGY IVDVPPKIAR KRASAMLATL MGTLVMARVT GSGDASDEIL
GAGREAALAI ATGLGPAGKT SARPAAKPRV SKAPTARG