Gene BBta_3572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3572 
Symbol 
ID5151526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3730243 
End bp3731229 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content66% 
IMG OID640558422 
ProductIclR family transcriptional regulator 
Protein accessionYP_001239568 
Protein GI148254983 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.649512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGAC GGTCTGAGCG ATTGAGCAGG GTGGGGATGC TGCCTGGAGA TCTCGCCGGT 
GACGGCGAGG TGATTCAGGT GGTGTCGCGG GCGTTCGACG TACTTCGTTG CTTCGAGGGG
CACGAGGCGC GGCTGGGCAA TTTAGAGATC TCGAACCGCT GTGGTCTGCC GCGGTCGACG
GTGTCTCGGC TGACGCACAC GCTGACCCGG ATGGGCCAAC TGGTGTATCT GCCGCGCGAT
CAGAAGTACC GGATCGGCCC GAGCGCGGTG GCCATGAGCA CGTCGATGAC GCGGGGCTTG
CAGCTGCGCA ACCTGATCCG CCAGCGCCTG CAGGACGTCG CGGAGCAGTT GCCGGGGACG
GTCGGTTTCG TCATTCCCGA TCGCTTCCAC CTCGTCTATC TGGAGTTCGG CCGTGCTGCG
AATGCGCTCG GGCTGCACGA GACCACCGGC AGCCGGATCT CGATGGCGTC GACCGCGGCT
GGCCACGCTT ATGTCGCAGC CCTCGAGCCC GAGGTCGGCG ATGCCCTGCT GACCGAGATG
GAACGCGAGC TGCCGGATGC GGCGAGGCTG CTGCGGCCGC GGCTGGAGCA CAACAGGCAG
TTCCTCAAGG AGCATGGCTA TGTGGTGGCC TGCGGCCTGT GGAGCCCGCA TATCAACGGT
GTCGCGCTGC CGCTGTGGTC GCCGCAGTAC CAGACCTATG TCGTGCTCAC GATCGGGCTG
CTGTCCGCGA TGTATGACGA GCAACGCCTG CATGACGAGG TGGCGCAGCC GATGCTCGAA
CTCGGCCGCA GCGTCGCTGC GCTGCTGCAG GGGGCCGAGG CCGACGTCTT CAACAGCCGG
ATGGAAAGAA AGCCGCTGCC TGTGACCACG AAGACCAACC ACAAGAACAA GACCATCACC
GGGGCAGGGG GAACGAATGA GTTGGCAGCC GGAGCTCGAG GAACTGGCCC GGCGCGAAGC
CTTCGCGCGG GAGATGGGCG GGCCTGA
 
Protein sequence
MGRRSERLSR VGMLPGDLAG DGEVIQVVSR AFDVLRCFEG HEARLGNLEI SNRCGLPRST 
VSRLTHTLTR MGQLVYLPRD QKYRIGPSAV AMSTSMTRGL QLRNLIRQRL QDVAEQLPGT
VGFVIPDRFH LVYLEFGRAA NALGLHETTG SRISMASTAA GHAYVAALEP EVGDALLTEM
ERELPDAARL LRPRLEHNRQ FLKEHGYVVA CGLWSPHING VALPLWSPQY QTYVVLTIGL
LSAMYDEQRL HDEVAQPMLE LGRSVAALLQ GAEADVFNSR MERKPLPVTT KTNHKNKTIT
GAGGTNELAA GARGTGPARS LRAGDGRA