| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3567 |
|---|
| Symbol | |
|---|
| ID | 5151839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3725842 |
|---|
| End bp | 3726978 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640558419 |
|---|
| Product | putative thiolase |
|---|
| Protein accession | YP_001239565 |
|---|
| Protein GI | 148254980 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTACA TCACCGGCAC CGGCCTCACC GCGTTTGGCA AGCACGATGG GCGCTCGTCG
CTCGATTTGA TGAGCATGGC AGCACAGCTC GCGCTCGACG ATGCCGGGCT CACGCGGCGC
GACATTGACG GCATCCTGTG CGGATACTCC ACCGTGTCGC CGCACATCAT GCTCGCGACC
GTGTTCGCCG AGCATTTCGG CATCACGCCG TCCTATGCTC ACGCCGTGCA GGTCGGCGGC
GCCACCGGGC TCGCAATGGT GATGCTGGCG CATCATCTGG TCGAGGCCGG CGTGGTCAGG
CACATGCTCG TCGTCGCTGG CGAGAACCGC CTCACCGGGC AGAGCCGCGA TGCGTCGATC
CAGGCTTTGG CGCAGGTCGG GCATCCCGTC TACGAACTGC CGCTGGGACC GACCATCCCC
GCATATTACG GTCTCGTCGC CTCGCGTTAC ATGCATGAAC ATGGCGTCAC CGAGCAGGAC
CTTGCCGAAT TCGCGGTGCT GATGCGCACG CATGCGCTCG ACCATCCCGG CGCCCAGTTC
CATGATCCGA TCACGGTGGC TGACGTCATG GCATCCAAGC CGGTGGCGCG GCCCCTGAAG
CTGCTCGACT GCTGCCCGGT GTCCGATGGC GGCGCGGCCA CCATCGTCAG CCGCGAACCG
ACCGGAGCCG CAGCGGTGCG TGTGCGCGGC TGTGCCCAGG CGCACACGCA TCAACACATC
ACGGCGGCGC CGGCGCTGAG CAACCTCGGG GCCGAGATCG CGATCACGAA GGCCAAAGCC
GCTGCCGGGG TCGAGATCGT CGATGTCGAC TACGCGGCGG TCTATGACAG TTTCACGATC
ACGCTCTGCA TGCTGCTCGA GGATCTCGGT CTGGCCGGCC GTGGCGAGGC GGCTGCGCGT
GTCAGGGCCG GCCATTTTGG CCGTGCGGGC GCGGTGCCGC TCAACACCCA TGGCGGGCTG
TTGAGCTATG GCCATTGCGG CGTCGGCGGC GCGATGGCGC ATCTCAACGA GGCGCATCTG
CAAATGACGG GACGGGCCGG CCACCGGCAG GTGCGCGAGG CGTCGCTGTC GCTGCTGCAT
GGCGATGGCG GCGTGCTGTC GTCGCATGTC AGCATGTTCT GGGAGCGGGT GCGATGA
|
|---|
| Protein sequence | MTYITGTGLT AFGKHDGRSS LDLMSMAAQL ALDDAGLTRR DIDGILCGYS TVSPHIMLAT
VFAEHFGITP SYAHAVQVGG ATGLAMVMLA HHLVEAGVVR HMLVVAGENR LTGQSRDASI
QALAQVGHPV YELPLGPTIP AYYGLVASRY MHEHGVTEQD LAEFAVLMRT HALDHPGAQF
HDPITVADVM ASKPVARPLK LLDCCPVSDG GAATIVSREP TGAAAVRVRG CAQAHTHQHI
TAAPALSNLG AEIAITKAKA AAGVEIVDVD YAAVYDSFTI TLCMLLEDLG LAGRGEAAAR
VRAGHFGRAG AVPLNTHGGL LSYGHCGVGG AMAHLNEAHL QMTGRAGHRQ VREASLSLLH
GDGGVLSSHV SMFWERVR
|
|---|
| |