Gene BBta_3565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3565 
Symbol 
ID5151680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3723062 
End bp3724267 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content65% 
IMG OID640558417 
Productputative Formyl-CoA transferase 
Protein accessionYP_001239563 
Protein GI148254978 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACCGC TTGCGGGCAT CAAGGTCATC GACATGACCA CCGTGCTGAT GGGGCCGTAT 
GCCGCCCAGA CGCTTGGCGA TTACGGCGCC GACGTCATCA AGGTGGAATC GCCCGAGGGC
GACGTCACCC GCAAGATCGG TCCATGGCAC CATCCCGGCA TGGGACCGGT GTTCCTCAAC
ACCAACCGCA GCAAGCGCGT GATCTGCCTC GACCTGAAGA AGCCGGCCGG CCGAGAGGCC
GTGCTGCGCA TGGTCAAGGA CGCCGACGTG CTCCTCTATA ACATCCGTCC CCAGGCGATG
GCGCGGCTGA ACCTCGGCTA CGACGTGGTG TCTGCGCTCA ATCCGCGGCT GGTCTATGCC
GGCGTGTTCG GCTTTGGTCA GGACGGACCC TATGCGGCAA AACCGGCCTA TGACGATCTG
ATCCAGGGCG GGGCGGCTTT GTCGCATCTG ATGGCGGTGG CCGGCGACGG CACGCCGCGC
TATGTGCCGA ATGCGCTGGT GGACCGCATC GTCGGGCTCA CCGCCGTCGG CGCGATCTGC
GCCAGCCTCG TGCATCGCGA CCGCAACGGA CGCGGCCAGC GCCTGGACGT GCCGATGTTC
GAAACCATGT CGGCTTTCAT CATGGGCGAT CACATGGGCG GGCTGACCTA CGCCCCGCCG
CTCGACCGCG GTGGCTATGC CCGGCATCTG TCGCCGGACC GCCGGCCTTA CAAGACCGCC
GACGGCTACA TCTGCGTCAT CGTCTACAAC GACAAGCAAT GGGACGCGTT CTTCACTGCG
TCAGGCCGCC CCGACCTGCG CGCCGACGAC CGCTTCAACA GCTTTGCCCG GCGTGCCGCG
AATATCGACC TCGTCTATGC CGAGCTCGCC CGCATCTTCG AAACGCGCAG CACGGCCGAA
TGGACTGATC TGCTGGATGC GGCCGACATC CCGGTCATGC CGATGCACGA CCTCGAGAGC
CTGCTGCACG ATCCGCATCT TGTCGCGACT GATTTCTTTC CTATCGTCCA GCATCCCACC
GAAGGCCAGA TCCGCAGCAC CCGCGTCTCG GCGACCTGGT CGGAAACCAA GGCTGAGCCG
CAGCGTCTGG CGGCGCGGCC GAACGAGCAT GGCGAGGAGA TCCTGCGCGA GCTGGGTTTC
TCGCATGACG AGATCGTCGC AATGATCCGC GACGGCGCAA CGACCCCGCC GCCTGCAAAG
GAGTGA
 
Protein sequence
MGPLAGIKVI DMTTVLMGPY AAQTLGDYGA DVIKVESPEG DVTRKIGPWH HPGMGPVFLN 
TNRSKRVICL DLKKPAGREA VLRMVKDADV LLYNIRPQAM ARLNLGYDVV SALNPRLVYA
GVFGFGQDGP YAAKPAYDDL IQGGAALSHL MAVAGDGTPR YVPNALVDRI VGLTAVGAIC
ASLVHRDRNG RGQRLDVPMF ETMSAFIMGD HMGGLTYAPP LDRGGYARHL SPDRRPYKTA
DGYICVIVYN DKQWDAFFTA SGRPDLRADD RFNSFARRAA NIDLVYAELA RIFETRSTAE
WTDLLDAADI PVMPMHDLES LLHDPHLVAT DFFPIVQHPT EGQIRSTRVS ATWSETKAEP
QRLAARPNEH GEEILRELGF SHDEIVAMIR DGATTPPPAK E