Gene BBta_3551 details

Gene Information

• Locus tag: BBta_3551
• Symbol: ilvD1
• ID: 5151507
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bradyrhizobium sp. BTAi1
• Kingdom: Bacteria
• Replicon accession: NC_009485
• Strand: -
• Start bp: 3706392
• End bp: 3708215
• Gene Length: 1824 bp
• Protein Length: 607 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640558403
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_001239549
• Protein GI: 148254964
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.347944
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 39
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACAAAAT CCAACGGACA TGCCGGCAAC GGCGCTGACA AGGGCCGCAA GCTGCGCTCG 
CAGGCCTGGT TCAACGATCC GCACAATCCG GGCATGACGG CGCTGTATCT CGAGCGCTAT 
CTCAATTTCG GCTTGACCCG TGCCGAGCTG CAATCGGGCA AGCCGATCAT CGGCATTGCC 
CAGACGGGCA ACGACCTGTC GCCCTGCAAC CGCCACCACA TCGAATTGGC GCATCGCGTG 
CGCGAAGGCA TCCGCGAAGC CGGCGGCATC GCGATGGAGT TTCCGACACA CCCGATCCAG 
GAGACCGGCA AGCGGCCGAC CGCGGCACTC GACCGCAACC TCGCTTATCT CGGACTTGTG 
GAAATCCTGT TCGGCTATCC GCTCGATGGC GTGGTGCTGA CCACCGGCTG CGACAAGACG 
ACGCCCGCCT GCCTGATGGC GGCGGCGACC GTGAACATCC CCGCGATCGT GCTGTCGGGC 
GGGCCGATGC TGAATGGCTG GCACGAGGGC CAGCGCACCG GCTCCGGCAC CGTGGTCTGG 
AAATCGCGCG AGCGGCTCGC CGCCGGCGAG ATCGACTATG AGGAGTTCAT GCAGATCGTG 
GCGTCGTCGG CGCCGTCGGT CGGCCACTGC AACACCATGG GCACCGCCTC GACCATGAAC 
GCGCTCGCCG AGGCGCTCGG CATGTCCCTG CCCGGCTGCG CCGCGATCCC CGCGCCGTAT 
CGCGAGCGCG GCCAGATCGC CTATGAGACG GGCAAGCGCA TCGTCGACAT GGTCTGGGAA 
GATCTGAAGC CGTCGGACAT CCTCACCCGC AAGGCGTTCG AGAACTGCAT CGTGGCGAAC 
TCCGCGATCG GTGGCTCGAC CAATGCGCCG ATCCACATCA ACGCGCTGGC GCGCCATGTC 
GGCGTCGAGC TCGATATCGA CGACTGGCAG AAGGTCGGCC ACGACGTGCC GCTGCTGGTC 
AACATGCAGC CGGCAGGCTT CTATCTCGGC GAGGAATTCC ACCGCGCCGG CGGCGTGCCG 
GCCGTGATCG GCGAGTTGAT GCGGCACAAG CGCATCCATG AGGACGTCAT CACCGTCAAC 
GGCCGCAGCA TGGGCGACAA TTGCCGCGCG GCGCCGAAGC CGGACAATGA CGTGATCTGG 
TCCTACGACA AGCCGCTGGT GAAGGACGCC GGCTTCCTGG TGCTGCGCGG CAATCTGTTC 
GATTCCGCGA TCATGAAGAC CAGCGTGATC TCCAAGGAAT TCCGCGACCG CTATCTCAGC 
AACCCGAAGG ACCCGAATGC CTTCGAAGGC CGCGCCATCG TGTTCGAGGG GCCGGAGGAC 
TACCACGACC GCATCGACGA TCCCGCGCTC GCCATCGACG AGCACTGCGT TCTGTTCATC 
CGCGGCGCCG GCCCGATCGG CTATCCCGGC GGCGCCGAGG TGGTGAACAT GCAGCCACCG 
GCCGCGCTGA TCAAACGCGG GATCCTGTCC CTGCCCTGCA TCGGCGACGG CCGGCAGTCC 
GGCACCTCGG GCTCGCCCTC GATCCTCAAC GCCTCGCCGG AAGCAGCCGC CGATGGCGGG 
CTCGCCATCC TCAGGACCGG CGACAAGGTG CGCATCGACC TCAACAAGGG CTCGGCCAAC 
ATCCTGATCT CCGACGAGGA GGTTGCGAAG CGCCACGCCG AGTTGAAGGC CAAGGGCGGC 
TTCCCGTATC CCGCCAATCA GACGCCATGG CAGGAGCTCT ATCGCAACAC TGTGGGCCAG 
CAGGCCACCG GTGCCTGCAT GGAGCTCGCC ACGCGGTATC AGAATATCGC TGGCACTGTC 
GGCGTGGCAC GGCATAATCA TTGA 

 

Protein sequence

MTKSNGHAGN GADKGRKLRS QAWFNDPHNP GMTALYLERY LNFGLTRAEL QSGKPIIGIA 
QTGNDLSPCN RHHIELAHRV REGIREAGGI AMEFPTHPIQ ETGKRPTAAL DRNLAYLGLV 
EILFGYPLDG VVLTTGCDKT TPACLMAAAT VNIPAIVLSG GPMLNGWHEG QRTGSGTVVW 
KSRERLAAGE IDYEEFMQIV ASSAPSVGHC NTMGTASTMN ALAEALGMSL PGCAAIPAPY 
RERGQIAYET GKRIVDMVWE DLKPSDILTR KAFENCIVAN SAIGGSTNAP IHINALARHV 
GVELDIDDWQ KVGHDVPLLV NMQPAGFYLG EEFHRAGGVP AVIGELMRHK RIHEDVITVN 
GRSMGDNCRA APKPDNDVIW SYDKPLVKDA GFLVLRGNLF DSAIMKTSVI SKEFRDRYLS 
NPKDPNAFEG RAIVFEGPED YHDRIDDPAL AIDEHCVLFI RGAGPIGYPG GAEVVNMQPP 
AALIKRGILS LPCIGDGRQS GTSGSPSILN ASPEAAADGG LAILRTGDKV RIDLNKGSAN 
ILISDEEVAK RHAELKAKGG FPYPANQTPW QELYRNTVGQ QATGACMELA TRYQNIAGTV 
GVARHNH