Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3547 |
Symbol | |
ID | 5150710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3703401 |
End bp | 3704081 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640558399 |
Product | hypothetical protein |
Protein accession | YP_001239545 |
Protein GI | 148254960 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACATCT CCCTTTACGG CGTCTCCGTC TGGATCCTGC CGATCATCGT CGCCATCACC TTTCATGAGG CCGCCCACGC CTTCGTGGCC TGGCGCTTCG GCGACGAGAC CGCATTGCGA CTCGGTCGCG TCAGCTTCAA CCCGCTGAAG CACATCGATC CGTTCGGGAC GATCCTGCTG CCAGGGATGC TGTTGCTCTC CGGCTCCCCC TTCCTGTTCG GCTACGCCAA GCCGGTCCCG GTCAATTTCC GCAATCTTCA GCCGCTGCGC GCCGGCATGG TCATGGTCGC GCTGGCCGGC CCGGCGACCA ATATCGCGCT GGCGCTGGCC GCGGCGCTGG CATTCCACGT GCTGCCACTG GTCCCGGCGG CTGGCGCGCA ATGGGTTGCC CATAATCTGC TCAATGCCTT TTCGTTCAAC ATCCTGCTCG CGGTTTTCAA TATGCTGCCG ATACCGCCGC TCGACGGCGG CCGGGTGGCG GTCGGCCTGC TGCCAGCGGT GCTGGCGCGC CCGTTTGCCC GCCTGGAACC CTATGGCATG CTGATTCTGA TCGGTTTTCT GATCCTGCTG CCGCTCGCGG GCTCCCAGTT CGGTCTTAAT CTTGATCTTG TGTCAGGGCT GCTCCGCGCC ACGACCGATT CTCTCAAGCA GCTGCTTCTG TTATTGACAG GCAATGCATA A
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Protein sequence | MNISLYGVSV WILPIIVAIT FHEAAHAFVA WRFGDETALR LGRVSFNPLK HIDPFGTILL PGMLLLSGSP FLFGYAKPVP VNFRNLQPLR AGMVMVALAG PATNIALALA AALAFHVLPL VPAAGAQWVA HNLLNAFSFN ILLAVFNMLP IPPLDGGRVA VGLLPAVLAR PFARLEPYGM LILIGFLILL PLAGSQFGLN LDLVSGLLRA TTDSLKQLLL LLTGNA
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