Gene BBta_3547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3547 
Symbol 
ID5150710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3703401 
End bp3704081 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content63% 
IMG OID640558399 
Producthypothetical protein 
Protein accessionYP_001239545 
Protein GI148254960 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACATCT CCCTTTACGG CGTCTCCGTC TGGATCCTGC CGATCATCGT CGCCATCACC 
TTTCATGAGG CCGCCCACGC CTTCGTGGCC TGGCGCTTCG GCGACGAGAC CGCATTGCGA
CTCGGTCGCG TCAGCTTCAA CCCGCTGAAG CACATCGATC CGTTCGGGAC GATCCTGCTG
CCAGGGATGC TGTTGCTCTC CGGCTCCCCC TTCCTGTTCG GCTACGCCAA GCCGGTCCCG
GTCAATTTCC GCAATCTTCA GCCGCTGCGC GCCGGCATGG TCATGGTCGC GCTGGCCGGC
CCGGCGACCA ATATCGCGCT GGCGCTGGCC GCGGCGCTGG CATTCCACGT GCTGCCACTG
GTCCCGGCGG CTGGCGCGCA ATGGGTTGCC CATAATCTGC TCAATGCCTT TTCGTTCAAC
ATCCTGCTCG CGGTTTTCAA TATGCTGCCG ATACCGCCGC TCGACGGCGG CCGGGTGGCG
GTCGGCCTGC TGCCAGCGGT GCTGGCGCGC CCGTTTGCCC GCCTGGAACC CTATGGCATG
CTGATTCTGA TCGGTTTTCT GATCCTGCTG CCGCTCGCGG GCTCCCAGTT CGGTCTTAAT
CTTGATCTTG TGTCAGGGCT GCTCCGCGCC ACGACCGATT CTCTCAAGCA GCTGCTTCTG
TTATTGACAG GCAATGCATA A
 
Protein sequence
MNISLYGVSV WILPIIVAIT FHEAAHAFVA WRFGDETALR LGRVSFNPLK HIDPFGTILL 
PGMLLLSGSP FLFGYAKPVP VNFRNLQPLR AGMVMVALAG PATNIALALA AALAFHVLPL
VPAAGAQWVA HNLLNAFSFN ILLAVFNMLP IPPLDGGRVA VGLLPAVLAR PFARLEPYGM
LILIGFLILL PLAGSQFGLN LDLVSGLLRA TTDSLKQLLL LLTGNA