| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3544 |
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| Symbol | exbD |
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| ID | 5151421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3701640 |
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| End bp | 3702110 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640558396 |
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| Product | biopolymer transport protein ExbD |
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| Protein accession | YP_001239542 |
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| Protein GI | 148254957 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGTCT CGCTCTCCGA AGGCGATCTC GACGACGATT TCGACGAGAC CCACGACATC
AACGTGACGC CCTTCATCGA CGTCATCCTG GTGCTGCTCA TCATCTTCAT GGTGGCGGCG
CCACTGTCGA CCGTCGATCT GCCGATCGAC CTGCCGTCGT CGAGCGCGCA GCCGCAGAAG
AAGCCGGACA AGCCGACTTA TGTGTCGATC AAGCCGGATC TGGGCCTTGC GATCGGAGAA
AATCTCGTCA AGCGGGTCGA TCTCGTGCGT GAGCTCGATG CGATGCCGGA GGCGAGCAAG
GACCGTCCGA TCTTCCTGCG CGCCGACAAG CAGGTGCCCT ATGGCGAGCT GATGGGGGTG
CTGGAGCTGC TGCGGGCCGG CGGCTACACC AAGATCAAGC TGGTGGCCTT GGAAGCGCCG
CCGGCCGCGG CGACCGGACT GCCGGCCGCG ACACCGCCCG CCCAGCCGTG A
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| Protein sequence | MAVSLSEGDL DDDFDETHDI NVTPFIDVIL VLLIIFMVAA PLSTVDLPID LPSSSAQPQK
KPDKPTYVSI KPDLGLAIGE NLVKRVDLVR ELDAMPEASK DRPIFLRADK QVPYGELMGV
LELLRAGGYT KIKLVALEAP PAAATGLPAA TPPAQP
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