Gene BBta_3541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3541 
Symbol 
ID5151419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3699991 
End bp3700680 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content64% 
IMG OID640558394 
Productputative hydroxylase 
Protein accessionYP_001239540 
Protein GI148254955 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.11463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCT GCATCCCCGA CGTTCTGTCC AAGGACGAGG TCGCCGAGTT CCGCCGCATC 
ATGGATGCGG CGGAGTGGGA GGACGGCCGG TCGACCGCCG GGGCGCAATC GGCCATGGTC
AAGCGCAACG AGCAGTTGCC ACCCGACGGC GAGGCGGCGC GGATGCTGGG CCAGCGCATC
ATCACGGCGC TGACCAGGAA TCCGCGCTTC CTCTCGGCGG CGGTCCCGCT GCAGATCTTT
CCGCCCTTGT TCAATCGCTA TACCGCCTCG CGCGGCGACC ATTTCGGCAT CCATGTCGAC
AATGCCGTGC GCGGCGATCC GTTGACGGGG CTGCGCATCC GCACCGACCT GTCAATGACC
TTGTTCCTGG CCGAGCCCGA CACCTATGAC GGTGGCGAAC TCGTGATCGA GGACACTTAC
GGCTCGCACG AAGTCAAGTT GCCGGCCGGG CACGCGGTGC TGTATCCGTC ATCGAGCCTT
CACATGGTCA CGCCGGTGAC GCGCGGCGCC CGGGTCGCCT CTTTTTTCTG GATGCAGAGC
ATGATACGGG ATGCCCACGT CCGGAGCATG ATCTTCGATC TGGACACGGC GATCCAGAGT
TTGACGGAAC GCCTCGGGAG GGACGATCCC GATGCGGTCA AGCTCACCGG CATCTACCAC
AATCTGATCC GGCAATGGGC CGAGGTTTAG
 
Protein sequence
MLICIPDVLS KDEVAEFRRI MDAAEWEDGR STAGAQSAMV KRNEQLPPDG EAARMLGQRI 
ITALTRNPRF LSAAVPLQIF PPLFNRYTAS RGDHFGIHVD NAVRGDPLTG LRIRTDLSMT
LFLAEPDTYD GGELVIEDTY GSHEVKLPAG HAVLYPSSSL HMVTPVTRGA RVASFFWMQS
MIRDAHVRSM IFDLDTAIQS LTERLGRDDP DAVKLTGIYH NLIRQWAEV