Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3541 |
Symbol | |
ID | 5151419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3699991 |
End bp | 3700680 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640558394 |
Product | putative hydroxylase |
Protein accession | YP_001239540 |
Protein GI | 148254955 |
COG category | [S] Function unknown |
COG ID | [COG3128] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.11463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCT GCATCCCCGA CGTTCTGTCC AAGGACGAGG TCGCCGAGTT CCGCCGCATC ATGGATGCGG CGGAGTGGGA GGACGGCCGG TCGACCGCCG GGGCGCAATC GGCCATGGTC AAGCGCAACG AGCAGTTGCC ACCCGACGGC GAGGCGGCGC GGATGCTGGG CCAGCGCATC ATCACGGCGC TGACCAGGAA TCCGCGCTTC CTCTCGGCGG CGGTCCCGCT GCAGATCTTT CCGCCCTTGT TCAATCGCTA TACCGCCTCG CGCGGCGACC ATTTCGGCAT CCATGTCGAC AATGCCGTGC GCGGCGATCC GTTGACGGGG CTGCGCATCC GCACCGACCT GTCAATGACC TTGTTCCTGG CCGAGCCCGA CACCTATGAC GGTGGCGAAC TCGTGATCGA GGACACTTAC GGCTCGCACG AAGTCAAGTT GCCGGCCGGG CACGCGGTGC TGTATCCGTC ATCGAGCCTT CACATGGTCA CGCCGGTGAC GCGCGGCGCC CGGGTCGCCT CTTTTTTCTG GATGCAGAGC ATGATACGGG ATGCCCACGT CCGGAGCATG ATCTTCGATC TGGACACGGC GATCCAGAGT TTGACGGAAC GCCTCGGGAG GGACGATCCC GATGCGGTCA AGCTCACCGG CATCTACCAC AATCTGATCC GGCAATGGGC CGAGGTTTAG
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Protein sequence | MLICIPDVLS KDEVAEFRRI MDAAEWEDGR STAGAQSAMV KRNEQLPPDG EAARMLGQRI ITALTRNPRF LSAAVPLQIF PPLFNRYTAS RGDHFGIHVD NAVRGDPLTG LRIRTDLSMT LFLAEPDTYD GGELVIEDTY GSHEVKLPAG HAVLYPSSSL HMVTPVTRGA RVASFFWMQS MIRDAHVRSM IFDLDTAIQS LTERLGRDDP DAVKLTGIYH NLIRQWAEV
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