| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3540 |
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| Symbol | |
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| ID | 5151469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3697571 |
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| End bp | 3699988 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640558393 |
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| Product | putative outer membrane TonB-dependent receptor |
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| Protein accession | YP_001239539 |
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| Protein GI | 148254954 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0614736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGG TGAGAGCACC GCGTTCGCTG CGGGCAGGCG CAGCGTTGAA GTTCATTGAC
GGACGGGGAG AGGGGCCGTT CGTCACCAAA GTATCGGCCG TCGCTGGATT GATGGCGGTG
GCGTCGGTGT CGTCGGCCGA GGCGCAGCCC GCATCCGATC TGCCGCCGGT CAATGTCGAT
GCGCCGATCG CGCGCGCCAA GCCGACCGCC TCCAAGCCGA CCGCCGAGCA GGTCCGCGCG
CGCAATGCCC TGCGCCGCGC GGCGCGTCAG CAGGGCGCGC AGCAGGCGGC CGTGGCGTTC
CCGAACGCCG GCGGGCTCGC CGCGCCCGAT GCCAACCCCT ATGCGGACGC GGCCGAGCCC
TACAAGGTCA ACCGCGTCCA GGCGTCGGGC AAGTTTCCCG AACCGCTCCT CAACACGCCG
AAGACCATCA CGGTGATGAG CAAGGAAGTT CTGCAGGACA AGCACGTTAC CGCGCTGAAG
GAGATCGGCC GTTCGACGGC CGGCGTCACG CTCGGCTCGG GCGAGGGCGG CAACGCATTC
GGCGACCGCT TCTTCATCCG TGGTTTCGAT GCCCGCAATG ACGTCTTCAT CGACGGCATC
CGCGATCCCG CAGTGTCGAT CCGCGAGAAC TTCTTCACCG AGCAGATCGA GATCCTGCGC
GGCCCGGCCT CGTCCTATGC CGGACGCGGC ACCGCCGGCG GCGCCATCAA CATCGTCACC
AAGCAGGCCG GCGACACCAA CTTCAAGCGG ATGGATACCG AGTTCGGCAC CGACCAGCAG
AAGCGGGTGA CGCTGGATGT CAACCAGACG ATCTCGCCGA CCTTCTCGGT GCGCACCGGC
GGGCTGTTCC AGGACTCCAA CGTCGCGGGC CGCAACTACG TCACCGATGA TCGCTGGGGC
GCCTTCCTCT CGACCAAGTG GACCCCGATC GACGATCTCA AGATCACGAC GAACTACGTC
CACACCGATC TTTCCGGTTA TCCCGATTTC GGCGTGCCCT ATTACAAGCA GGGCAATGTG
CCGGTGACCT CGGCCGGCAT TCCGCGCGGT ACATGGTACG GCTTCCTCAA CCGCGACTTC
CAGACGGCCC GGCAGGATTT CGGCACGGCC GCGGCTGAGT ACAAGGTCAA CGAGGCGATC
ACTCTCACGA GCAAGTTCCG CGGCGAGCAC TCGCTGCTCA ACTATATCGG TACGCTGCCA
CAGAACCCGA ACACGACCAG CCCGAACCCG CTGCTCTGGA CGACGACGGC GAGCGCGCAG
AGCCGCTATC AGACCGTCGA CGTCTGGGCC AACCAGAACG ACGCGACGTT CAAGCTCGAT
ACCGGCGGCA TCAAGCACAC CGCGGTGCTC GGCACCGAGT TCTCCAACGA GAACATCTCG
ATTGATCGCT ACACCGGCCT GTCGTCCGAA TTGTTCGGCG GCGGCTCGAC CAGCACGGGT
GCGGTCACCG GCGTCAACGT CTATTCGCCG CAGTACACCA ACATCCCGTT CAGCATCACG
CCGTCGCTGG TCGGCAATCC CACCCGGTAC GGGGTCAACA CCAACAGTGT CTATGTGATG
GACACGGCGA ACTGGCGGGA CACGCTCATC CTGAACGGCG GCGTACGCTA TGACGGCTAC
AACATGAGCT CGTCGACCAA TTCGCCGAAA TACCTCAAGA TGAATGCCGA TCTGGTCAAC
TACAATGTCG GCCTGGTCTA CAAGCCGATG CCGATCGGCA GCCTCTATGC GGCCTATGCG
ACCTCGGCCA ATCCGTTCGG CTCCGAGCTC GACGCCACCG GCACCGATTA TGGCGGTGTG
CCGGCCAATA CCGCGATCCT GCTCGGGCCG GAGCGCAACA AGGCGGCCGA GCTCGGCACC
AAATGGGAGC TCGTCGATCG TCATCTGCTG GTCTCGGCGG CGCTGTTCCA GACCACCAAG
GACAATGCCC GCGAGACCGT CAACGGCCTG CTCACCTCGG GCGCGGCCTA CCGCATCCAG
GGCATCGACA TCGAGGCGGA AGGCAAGCTT ACCGACCGCT GGAGCATCTT CGGCGGCCTG
GTGCTGATGC AGTCGAAGGT CACGCAGAGC GGCGTCGCCT CGAATATCGG CCTGCAACTC
GCCAACATCG CGCACCAGTC CTTCAGCATG CTATCGAAAT ACAAGCTCGA CAGCGGCTGG
GAGATCGGCG GCCAGGCGGT CTACCGCTCC AAGGTCTATG GCGGCACCTT CGCGGCCAAC
ACCGGCAACG AGCTGCCGAG CTACTGGCGC TTCGACGCCT TCGTCGAGAA GCAGATCGAC
AAGAACTGGA CGATGAAGCT CTACGCGCAG AACCTGACCA ACAAGCTGTA TTACGACACG
CTGTATCGGA GCGCGGTGCC GTTCGTCGCC GTCGCGCCGG GCCGCGCCTT CTACATCATC
ACGACTGCGA AGTTCTGA
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| Protein sequence | MGQVRAPRSL RAGAALKFID GRGEGPFVTK VSAVAGLMAV ASVSSAEAQP ASDLPPVNVD
APIARAKPTA SKPTAEQVRA RNALRRAARQ QGAQQAAVAF PNAGGLAAPD ANPYADAAEP
YKVNRVQASG KFPEPLLNTP KTITVMSKEV LQDKHVTALK EIGRSTAGVT LGSGEGGNAF
GDRFFIRGFD ARNDVFIDGI RDPAVSIREN FFTEQIEILR GPASSYAGRG TAGGAINIVT
KQAGDTNFKR MDTEFGTDQQ KRVTLDVNQT ISPTFSVRTG GLFQDSNVAG RNYVTDDRWG
AFLSTKWTPI DDLKITTNYV HTDLSGYPDF GVPYYKQGNV PVTSAGIPRG TWYGFLNRDF
QTARQDFGTA AAEYKVNEAI TLTSKFRGEH SLLNYIGTLP QNPNTTSPNP LLWTTTASAQ
SRYQTVDVWA NQNDATFKLD TGGIKHTAVL GTEFSNENIS IDRYTGLSSE LFGGGSTSTG
AVTGVNVYSP QYTNIPFSIT PSLVGNPTRY GVNTNSVYVM DTANWRDTLI LNGGVRYDGY
NMSSSTNSPK YLKMNADLVN YNVGLVYKPM PIGSLYAAYA TSANPFGSEL DATGTDYGGV
PANTAILLGP ERNKAAELGT KWELVDRHLL VSAALFQTTK DNARETVNGL LTSGAAYRIQ
GIDIEAEGKL TDRWSIFGGL VLMQSKVTQS GVASNIGLQL ANIAHQSFSM LSKYKLDSGW
EIGGQAVYRS KVYGGTFAAN TGNELPSYWR FDAFVEKQID KNWTMKLYAQ NLTNKLYYDT
LYRSAVPFVA VAPGRAFYII TTAKF
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