| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3536 |
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| Symbol | |
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| ID | 5151560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3691732 |
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| End bp | 3694878 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640558389 |
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| Product | putative component of multidrug efflux pump, mdtB-like protein |
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| Protein accession | YP_001239535 |
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| Protein GI | 148254950 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGCG GCGGCATTTC GGCACCCTTC ATCAAATACC CCATCGGCAC CTCGCTGCTG
ATGGCGGGCA TCCTGTTCAT TGGCCTCGTC GCCTATCCGC TGCTGCCGGT CGCGCCGCTG
CCGCAGGTCG ACTTCCCGAC CATCCAGGTC ACGGCCAATT TGCCCGGCGG CAGCCCCGAG
ACCATGGCGA CCTCGGTCGC CCAGCCGCTG GAGCGGCAGT TCGCCCAGAT CCCCGGCATC
GCCCAGATGA CCTCGACCAG CTACCTGGGC ACCGCTGCGA TCACGATCCA GTTCGACCTC
AACCGCAACA TCGACGGCGC CGCCAACGAC GTCCAGGGCG CGATCAACGC CGCCTCAGGC
CAGTTGCCGA AGAACCTGCC GTCGCCACCG ACCTATCGCA AGGTCAATCC GGCTGATTCC
CCGATCCTGC TCTTGTCGGC GACCTCGGAG ACGCTGCCGC TGACCACCGT CAGCGACGCG
GTCGACGCCG GCCTCGCCCA GCAGATCAGC CAGATTTCGG GCGTCGCCCA GGTCATCATC
GGCGGTCAGC AGAAGCCCTC GATCCGCATC CAGATCGACC CGGCCAAGCT GGTCGCCAAG
GGCCTGTCGC TCGAGGACGT GCGCAGCCAG ATCGCGATCA CCACGGTCGA CGCCCCCAAG
GGCAATATCG ATGGAGAGCG GCGCGCCTAC ACCATCTACG CCAACGACCA GCTGACCGAC
TCGAAGGACT GGAACGACGT CATCATCGCC TACCGCAATG GCGGCCCGCT GCGGATCCGC
GACATCGGAC AGGCGGTGTC CGCGGCCGAG GATGCCAAGC AGGCGGCCTG GGCCAACGGC
CAGCGCGGCG TGTTCCTGGT GATCTTCAAG CAACCCGGCG CGAACGTCAT CGAGACCGTC
GACCGCATCA AGGGGCTGCT GCCGCGGCTG GTCGCGGCAA TCCCGCCGGC GATCAAGATC
GATGTCATCT CCGACCGCAC CACCACGATC CGCGCCGCGG TCGAGGACGT CCAGTTCACC
TTGATCCTGA CCATTTTCCT GGTCGTGATG GTGATCTTCA TCTTCCTGCG CAGCTTCTGG
GCCACCGTGA TCCCGACCAT CACGGTGCCG CTGGCGCTGC TCGGCGCCTG CGCCATGATG
TGGGGCGTCG GCTATACGCT GGACAATCTC TCGCTGATGG CGCTGACCAT TGCCGTCGGC
TTCGTGGTCG ACGACGCCAT CGTGATGCTC GAGAACATCT CGCGCTATGT GGAGGAGGGC
GAGACGCCGA TGGCGGCCGC CTACAAGGGC GCCAAGGAGA TCGGCTTCAC CATTGTCTCG
ATCTCGATCT CGCTGGTAGC GGTGCTGATC CCGCTTTTGC TGATGGGCGG CATCATCGGC
CGCCTGTTCC GTGAATTCGC GGTCGTGCTG GCCATGACCA TCTTCGTCTC GATGTTCGTG
TCGCTGACGC TCACGCCGAT GATGGCCTCG CGCTTCCTGC GCAACGAGCA CGCCGCGCAG
CACGGCAAGT TCTATCAATG GAGCGAGGCC GCGTTCGACG CGATGCTGCG CGCCTATGAG
AAGGGCCTCG ACCTGGCACT GCGCTGGCGC TTTGCGACCT TGATGGTGTT CTTCGCCACG
CTCGGGCTCT CGGTCTATCT GTTCATCCTG ATCCCGAAGG GCTTCTTCCC GCAGCAGGAC
GTCGGCCTGA TCACCGCGAC CTCGGAAGCC TCGCAGGACA TCTCGTTCAA GGCGATGCAG
TCGCGCCAGG AGGCGCTCGC CAAGATCGTG ATGGCCGATC ATGACGTCGC CAGCCTCGCG
ATGAACATTG GCGGCTCCGG CCGCGCCGGC AACAACGGCA ACATGTTCAT CACCCTGAAG
CCGCGTGAGG AGCGCGACGC GACGGCACAG CAGATCATCG CCCGCCTCCG GCCGCAGCTC
GAGAAGGTCG AGGGCGCGCG GCTCTATATG CAGGCGGCAC AGGACATCCG GCTCGGCGGC
CGGCCGTCCC GGACCCAATT CGAGTTCACC TTGCAGGACC CGAACCTCGC TGAGCTCAAC
GAATGGGCGC CGAAGATCCT GGAGAAGATG CGCTCGCTGC CGCAACTGCG CGACGTCGCC
ACCGACCAGC AGGCCGACGG CACCACCGTG CAGCTCGCGA TCAACCGCGA CACCGCCTCA
CGCTACGGCA TCACGCCGCA GCTGATCGAC GATACGCTCT ATGATGCGTT CGGGCAGCGT
CAGGTGGCGC AGTACTTCAC CCAGCTCAAC TCCTACCGCG TGATCCTGGA GATCCTGCCG
GAGCTGCAGG GCAGTCTCGA CACTCTGAAC AAGCTGTATG TGAAATCGCC GACCACCGGC
GACCAGGTGC CGCTCTCGAC CTTCGCCAGC TGGACCACCG CGCCGGTGAG GCCGCTGTCG
ATCAGCCATC AGGGCCAGTT CCCGTCGATC ACGATCAGCT TCAATCTCGC CCAGGGCGTG
GCGCTCGGCC AGGCAACGGA CGCGGTGCAG CGCGCGATGG TCGAGCTCGG CGCGCCCTCG
ACACTGAACT CGAGCTTCCA GGGCACCGCG CAGGCCTTCC AGCAGTCGCT GTCGACCGTG
CCGCTGCTGA TCCTTGCAGC GCTCGTTGTC GTCTATCTGA TCCTCGGCAT CCTCTACGAG
AGCTACATCC ATCCGATCAC GATCCTGTCG ACCCTGCCCT CGGCCGGCGT CGGCGCGCTC
GCGATCCTGA TGGCGTTCGG CTACGATTTC AGCCTGATCG CCCTGATCGG CGTCATTCTG
CTGATTGGCA TCGTGAAGAA GAACGGCATC ATGATGGTCG ACTTCGCCAT CGCCGCCGAG
CGCGACCAGC ATCTGCCACC GGAGCAGTCG ATCCGCCAGG CCGCCCTGCT CCGCTTCCGC
CCGATCATGA TGACGACGAT GGCCGCGCTG CTCGGCGGCG TGCCCTTGAT GCTCGGCAAC
GGCACCGGCT CGGAGATCCG CCAACCGCTC GGCTATGCCA TGGTCGGCGG CCTGATCGTC
AGCCAGATGC TGACCCTGTT CACGACGCCG GTCGTCTATC TGTATCTCGA CAAGGTCAAC
AACGCCTTCG CCCGCTGGGG CCGCACGCAT ATCGACCACG AGCCGGATGC TGCGGCGGCC
GGCCCGGTCA AGGAAGCGGC GGAATAA
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| Protein sequence | MNGGGISAPF IKYPIGTSLL MAGILFIGLV AYPLLPVAPL PQVDFPTIQV TANLPGGSPE
TMATSVAQPL ERQFAQIPGI AQMTSTSYLG TAAITIQFDL NRNIDGAAND VQGAINAASG
QLPKNLPSPP TYRKVNPADS PILLLSATSE TLPLTTVSDA VDAGLAQQIS QISGVAQVII
GGQQKPSIRI QIDPAKLVAK GLSLEDVRSQ IAITTVDAPK GNIDGERRAY TIYANDQLTD
SKDWNDVIIA YRNGGPLRIR DIGQAVSAAE DAKQAAWANG QRGVFLVIFK QPGANVIETV
DRIKGLLPRL VAAIPPAIKI DVISDRTTTI RAAVEDVQFT LILTIFLVVM VIFIFLRSFW
ATVIPTITVP LALLGACAMM WGVGYTLDNL SLMALTIAVG FVVDDAIVML ENISRYVEEG
ETPMAAAYKG AKEIGFTIVS ISISLVAVLI PLLLMGGIIG RLFREFAVVL AMTIFVSMFV
SLTLTPMMAS RFLRNEHAAQ HGKFYQWSEA AFDAMLRAYE KGLDLALRWR FATLMVFFAT
LGLSVYLFIL IPKGFFPQQD VGLITATSEA SQDISFKAMQ SRQEALAKIV MADHDVASLA
MNIGGSGRAG NNGNMFITLK PREERDATAQ QIIARLRPQL EKVEGARLYM QAAQDIRLGG
RPSRTQFEFT LQDPNLAELN EWAPKILEKM RSLPQLRDVA TDQQADGTTV QLAINRDTAS
RYGITPQLID DTLYDAFGQR QVAQYFTQLN SYRVILEILP ELQGSLDTLN KLYVKSPTTG
DQVPLSTFAS WTTAPVRPLS ISHQGQFPSI TISFNLAQGV ALGQATDAVQ RAMVELGAPS
TLNSSFQGTA QAFQQSLSTV PLLILAALVV VYLILGILYE SYIHPITILS TLPSAGVGAL
AILMAFGYDF SLIALIGVIL LIGIVKKNGI MMVDFAIAAE RDQHLPPEQS IRQAALLRFR
PIMMTTMAAL LGGVPLMLGN GTGSEIRQPL GYAMVGGLIV SQMLTLFTTP VVYLYLDKVN
NAFARWGRTH IDHEPDAAAA GPVKEAAE
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