Gene BBta_3519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3519 
SymbolfabF 
ID5151031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3672350 
End bp3673624 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content66% 
IMG OID640558371 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_001239518 
Protein GI148254933 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTAC GCGACAAGTT TGGACGCCCC ATCGTGGTTG TGACCGGGAT GGGCATCGTC 
ACCTCGCTCG GCGCCGGCAA AGCAGAGAAC TGGAGCAAGC TGGTCGCCGG CGAATCCGGC
ATCCGCACCA TCACGCGCTT TCCGATCGAC GGCCTGAAGA CCACGATGGC CGGCACCGTC
GATTTCGTCC CGGTCGCCCC TTTCACCTCG ACAGGGCTCT CCGAACGACT CGGCCACATG
GCGGTCGAAG AAGCGATCGC GCAATCCGGG ATCGGCACCA AGGGTGACTT CCCGGGTCCG
CTGTTTCTCG CGGTTGCGCC GGTCGAGATA GAATGGCCGC AGCGTCTGGA GCTCGCGCAC
GAGGTCGGCG GCACGCAATT CACCTATGAC GACCTGCTGA GGGTCTGCGG CGGCGGCAAG
TTCGTGAATT ATCACCACCG CTTCCTGTTC GGCTCGGTCG CGGATTCGCT GTCGGATACG
TTCGGCACCA AGGGGTCGCC GATCTCGCTG TCGACCGCCT GCGCCTCCGG CGCGACCGCG
ATCCAGCTCG GTGTCGAAGC CATCCGGCGC GGCGAGACCG ATGTCGCGCT GTGCGCGGCC
ACCGAGGGCT CGGTGAATCC GGAGGGGCTG GTGCGCTTCT CGCTGCTGTC GGCGCTGTCG
ACGCAGAACG ATCCGCCGCA GGCGGCCTCC AAGCCGTTCT CCAAGAACCG CGACGGTTTC
GTGATGGCCG AGGGCGCCGG CGCGCTGGTA CTGGAGAGCT ACGATGCGGC AGTGGCGCGC
GGCGCCAAGA TCCTCGGCGT CGTCGCCGGC TGCGGCGAAC TGACCGATTC CTTCCATCGC
ACCCGCTCCT CGCCGGACGG CAAGCCGATC ATCGGCTGCA TCCGCAAGGC GTTGGCCGAT
GCCGGCATGG CGCCGGAGCA GATCGACCAC ATCAACGCCC ACGGCACCGC CACGCCCGAG
AACGACAAGA TGGAATATGT CGGCGTCTCC GCCGTGTTCG GCGATTACAC CAGCAGGATT
CCGGTCTCGT CCAACAAGTC GATGGTCGGG CACACCATCT CTGCGGCCGG CGCGGTGGAG
GCGATCTTCT CGCTGCTCAC GCTGGAGCAT CAGCGGATTC CGCCGACCAT CAATTTCGAT
GTTCCGGATC CCGCGATCCT GTTCGACGTG GTCGGCAACA AGGCGCGCGA TGCGCGCGTC
ACCACCGTGA TGTCGAACTC GTTCGGGTTT GGCGGCCAGA ACGCCTCGCT GATCCTGACC
CGCGAACCGG CCTGA
 
Protein sequence
MSVRDKFGRP IVVVTGMGIV TSLGAGKAEN WSKLVAGESG IRTITRFPID GLKTTMAGTV 
DFVPVAPFTS TGLSERLGHM AVEEAIAQSG IGTKGDFPGP LFLAVAPVEI EWPQRLELAH
EVGGTQFTYD DLLRVCGGGK FVNYHHRFLF GSVADSLSDT FGTKGSPISL STACASGATA
IQLGVEAIRR GETDVALCAA TEGSVNPEGL VRFSLLSALS TQNDPPQAAS KPFSKNRDGF
VMAEGAGALV LESYDAAVAR GAKILGVVAG CGELTDSFHR TRSSPDGKPI IGCIRKALAD
AGMAPEQIDH INAHGTATPE NDKMEYVGVS AVFGDYTSRI PVSSNKSMVG HTISAAGAVE
AIFSLLTLEH QRIPPTINFD VPDPAILFDV VGNKARDARV TTVMSNSFGF GGQNASLILT
REPA