| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3505 |
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| Symbol | psd |
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| ID | 5150662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3656576 |
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| End bp | 3657274 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640558357 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_001239504 |
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| Protein GI | 148254919 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.583173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGATCA GCAATTCCAT TCGTGCTCAG ATTCCCCCGA TTCACCCCGA AGGCTATCCC
TTCATCGGAG GATTTGCCCT CGTCAGCCTG ATCCTGTTCT GGATCTTCAC CCCACTTGGC
TGGATCGGAA CGCTGCTCAC CGTCTGGTGC GCGCTGTTCT TTCGCGATCC GATCCGCGTC
ACCCCGCAGC GGGAGGGGCT GGTGGTGGCA CCGGCCGACG GGCGGATCTC GATGATTACG
CGGGCGCTGC CGCCGGCCGA GCTCGGCCTC GGGGACCGTC CACTGCTGCG CGTATCGATC
TTCATGAGCG TCTTCAATGT TCACGTGAAC CGCAGCCCGG TGGCCGGTCG GATCGAGAAG
ATCTCCTACC GCCCCGGCGC GTTCATCAAT GCAGAGCTCG ACAAAGCGAG CGAGGACAAT
GAGCGCAACT CGCTCGCAAT CTCGACGCCC CACGGCAAGA TCGGCGTGGT CCAGATCGCC
GGTCTCGTGG CGCGCCGGAT TGTGTCGTTC GTGCGCGAAG GCCAGACGGT CGGTGCCGGC
GAGCGCTTCG GCCTGATCCG GTTCGGATCG CGGCTCGACG TCTATCTGCC TGATGGCACG
GAAGTTCTGG TTTCGGAGGG GCAGACCGCC ATTGCCGGCG AAACCATCCT GGCCGATTTC
GATGTGGCCA CGCCTGGACT GACGTTCCGG AGCCAGTGA
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| Protein sequence | MSISNSIRAQ IPPIHPEGYP FIGGFALVSL ILFWIFTPLG WIGTLLTVWC ALFFRDPIRV
TPQREGLVVA PADGRISMIT RALPPAELGL GDRPLLRVSI FMSVFNVHVN RSPVAGRIEK
ISYRPGAFIN AELDKASEDN ERNSLAISTP HGKIGVVQIA GLVARRIVSF VREGQTVGAG
ERFGLIRFGS RLDVYLPDGT EVLVSEGQTA IAGETILADF DVATPGLTFR SQ
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