Gene BBta_3504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3504 
Symbol 
ID5150661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3654483 
End bp3656456 
Gene Length1974 bp 
Protein Length657 aa 
Translation table11 
GC content64% 
IMG OID640558356 
Productmultidrug ABC transporter ATPase/permease 
Protein accessionYP_001239503 
Protein GI148254918 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCTG ATTCCGCCTC CGATCCTGCC GCCAACCAGC CGCAAGCGTC CCTCGAGCAG 
GGAACGCTGG CCGGCACCTT GCGGCGTCTC TGGCCCTTCA TCTGGCCGAG CGATCGGGCC
GATCTCAAAA TGCGCGTGTT GTGGTCGGTC GTGCTGCTGC TCGCGGCCAA GGTCGCGACG
CTTGTTCTGC CCTTCACCTT CAAATGGACC ACCGACGCGC TGACCGGCGC CAACACTGCG
CCAATTCAAC CGGATAACTG GGCCTTCTGG CTGGTTGCCT CGCCCATCGT GATGACAGCG
AGCTACGGCG CGATACGCGT GCTGATGGCG GTGTTGACGC AATGGCGCGA CGGCATCTTC
GCCCGCGTCG CCATGCATGC GGTGCGCAAG CTCGCGACCA TCACTTTCGT CCACATGCAC
GAATTGTCGC TGCGCTTTCA TCTGGAGCGC AAGACCGGCG GTCTGACCCG CGTGCTCGAA
CGCGGCCGCA ACGCTATCGA GACGATCGTG CGCATGGTGA TCCTGCAGCT GATCCCGACG
ATCGTCGAGG TCTCACTGCT GACCGCGGTG CTGCTGTGGC AGTTCGACTG GCGTTACGTG
CTGGTCACTC TGGCCATGGT GGCGGCCTAT CTTTACTACA CCTACATCGC GACCGAATGG
CGCATCGAGA TCCGGCGTCG CATGAACGAC TCGGATACCG AGGCCAATAC CAAAGCGATC
GACTCGCTTT TGAACTATGA GACGGTGAAG TATTTCGGCG CCGAGGCGCG CGAGGCCGAG
CGCTACGACC GCTCGATGGA GCGCTATGAG CGCGCCAGCG TCAAAACCTA TACTTCGCTC
GCGGTGCTCA ACGCAGGGCA GGCGGTGATC TTCACCATCG GGCTGACTGC GGCGATGCTG
ATGTGTGCCC AAGGCGTGCG TCAGGGCCAT AACACGGTCG GCGACTTCGT CATGATCAAC
AGCATGATGA TACAGCTGTA CCAGCCGCTG AACTTTATGG GCATGGTGTA CCGCGAGATC
AAGCAGGCGA TCATCGACAT CGAGAAGATG TTCGGCGTGC TCACGCGCGA TGCAGAGGTG
AAGGATGCGC CGGGGGCGAA GCCGCTCGTG GTGACGAGCG GCCAGCTCCG CTTCGAGGAT
GTCCGCTTCG CCTATGAGCC GGACCGGCCG ATCCTGCAGG GGCTCAGCTT CGAGGTGCCC
GCCGGCAAGA CGGTTGCGAT CGTGGGGCCG TCGGGCGCTG GCAAGTCGAC CATCTCGCGG
CTGCTGTTCC GGCTGTACGA CGTGTCCAGC GGCCGCATCC TGATCGATGG GCAGGACATT
CGCGACGTCA CCCAGGTGTC GCTGCGCGCC CAGATCGGCA TGGTGCCGCA GGATACCGTG
CTGTTCAACG ACACCATCCG CTACAATATC CGCTATGGGC GATGGGATGC CGATGATGCC
GCGGTCGAGG AGGCCGCGCG GCTGGCCCAG ATCGACGGCC TGATCCGGAT GGCCCCCAAG
GGCTACGAGA CGCAGGTGGG TGAGCGCGGT CTGAAGCTCT CCGGCGGTGA AAAGCAGCGC
GTCGCGATCG CCCGAACGAT CCTCAAGGGT CCGCCGATCC TGGTCCTGGA CGAGGCCACC
TCGGCACTGG ATAGCCATAC TGAGCACGAG ATTCAGGAGG CGCTCGACCG GGTGTCGCGC
AACCGGACCT CGGTGGTGAT CGCGCACCGG CTCTCGACGA TTGTGGCTGC CGACGAGATC
ATTGTGCTGG ACCGGGGTAG CATCGCGGAG CGGGGCACCC ATGCCGAGTT GCTCGCAAAG
GGCGGTCTCT ATGCCAGCAT GTGGAACCGC CAGCGCGAGG CCGAGGCGGC GCGCGAGAAG
CTGGCTCAGA TCGGCGACGA CGTTTCGGCT CCGAACCGCA ATCCGCCCGG TCGAAGCGAG
CCGGAGGTGA CCAGACCCGA TCTGGACGGT CCAGTGGCGA CGGCTGCCGA ATGA
 
Protein sequence
MPPDSASDPA ANQPQASLEQ GTLAGTLRRL WPFIWPSDRA DLKMRVLWSV VLLLAAKVAT 
LVLPFTFKWT TDALTGANTA PIQPDNWAFW LVASPIVMTA SYGAIRVLMA VLTQWRDGIF
ARVAMHAVRK LATITFVHMH ELSLRFHLER KTGGLTRVLE RGRNAIETIV RMVILQLIPT
IVEVSLLTAV LLWQFDWRYV LVTLAMVAAY LYYTYIATEW RIEIRRRMND SDTEANTKAI
DSLLNYETVK YFGAEAREAE RYDRSMERYE RASVKTYTSL AVLNAGQAVI FTIGLTAAML
MCAQGVRQGH NTVGDFVMIN SMMIQLYQPL NFMGMVYREI KQAIIDIEKM FGVLTRDAEV
KDAPGAKPLV VTSGQLRFED VRFAYEPDRP ILQGLSFEVP AGKTVAIVGP SGAGKSTISR
LLFRLYDVSS GRILIDGQDI RDVTQVSLRA QIGMVPQDTV LFNDTIRYNI RYGRWDADDA
AVEEAARLAQ IDGLIRMAPK GYETQVGERG LKLSGGEKQR VAIARTILKG PPILVLDEAT
SALDSHTEHE IQEALDRVSR NRTSVVIAHR LSTIVAADEI IVLDRGSIAE RGTHAELLAK
GGLYASMWNR QREAEAAREK LAQIGDDVSA PNRNPPGRSE PEVTRPDLDG PVATAAE