Gene BBta_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3488 
Symbol 
ID5149743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3640519 
End bp3640929 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content65% 
IMG OID640558340 
Producthypothetical protein 
Protein accessionYP_001239487 
Protein GI148254902 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.402578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.690871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTG CTGCGCCTGA AACCCGCACC GTCGTCGTCG AACGCGAGTT CGCACATCCG 
CCGGAAAAGC TGTGGCGCGC GCTGACGCAG CCGCATCTGA TCGCGGAATG GCTGATGGCG
AATGATTTCA TTCCGGAGCT CGAACATCGC TTCAAGCTGA AGGCCGACTG GGGCATCGTC
GACTGCCAGG TCCTGGCCAT CGAGCCGAAC AGGACGCTGG CCTATAGCTG GGCCGCGCTC
GGCCTCGACA GCGTGGTGAC CTGGACGCTG ACGCCGACGC GCCATGGCAC GCATCTGCGC
ATGGAGCAGA CCGGCTTCAC CGCCGATCAG ACCCGTGCCT ATCAGGGCGC GCGCTACGGC
TGGCCGAAAT TCTTCGACGG CCTGGAGCAG ACTCTGGCGC GGCTCGACTG A
 
Protein sequence
MTSAAPETRT VVVEREFAHP PEKLWRALTQ PHLIAEWLMA NDFIPELEHR FKLKADWGIV 
DCQVLAIEPN RTLAYSWAAL GLDSVVTWTL TPTRHGTHLR MEQTGFTADQ TRAYQGARYG
WPKFFDGLEQ TLARLD