Gene BBta_3486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3486 
Symbol 
ID5149799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3639831 
End bp3640232 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content70% 
IMG OID640558338 
Producthypothetical protein 
Protein accessionYP_001239485 
Protein GI148254900 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.927106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCA AGCGCAGCGG TTCGCGGCCT TCCGGCGTGG GAGCGCCCGA TCATTTCACC 
GGCGCGGTGC GCAGCGATCC CCTGTTCGAC GTGGTGGAGC CGGCGCGGGC GCGGGGCGGG
CTGGTCACCT TCGAGCCGGG GGCGCGCACG GCGTGGCACA GCCATCCGCT GGGGCAGGTC
CTGATCGTGA CCTCCGGCCT CGGCTGGGTG CAGCGCGACG GCGGCGCGAT CGAGGAGATC
CGCCCCGGCG ACGTCGTGAG GTTCGAGCCC GGCGAGCGGC ACTGGCATGG CGCGACCGCC
ACGACCGCAA TGTCTCACAT CGCGATCACG GAGTCGTTGA ACGGCAAGAC GGCCGACTGG
TTCGAGCATG TGAGCGAGGC ACAATATCGC GCGCGTTTGT GA
 
Protein sequence
MDIKRSGSRP SGVGAPDHFT GAVRSDPLFD VVEPARARGG LVTFEPGART AWHSHPLGQV 
LIVTSGLGWV QRDGGAIEEI RPGDVVRFEP GERHWHGATA TTAMSHIAIT ESLNGKTADW
FEHVSEAQYR ARL