Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3469 |
Symbol | |
ID | 5155218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3620714 |
End bp | 3623965 |
Gene Length | 3252 bp |
Protein Length | 1083 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640558321 |
Product | putative cation efflux system protein |
Protein accession | YP_001239468 |
Protein GI | 148254883 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.806114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTCAAAA GCCTCATCCA GTTCGGCCTC ACCCGCAGCG CCATCGTCGT GCTGGGCCTG CTCGTGTTCT GCGCAGCCGG CATCGCCGCG TTCCTCAGAT TGAACATCGA AGCCTACCCC AATCCTGCAC CGGTGATCCT GGAGATCACG GCGCAGGCGT CGGGCCTGTC GGCAGAGGAG ATGGAGAAGT ACTATACGAT CCCGATGGAG GTCGGGCTCT ATCCGACCCC GGGCGTCGTC AACATCCGCT CGACCTCGTT CTACGGCCTC GCTTTCGTTC GCGTCACGTT CAAATACGGT GTCGACTATT ATTTCGCTCT GACGCAGGCC GCCAACAGCA TCCAGCAGAA TATCCAGCTG CCCGGCAATC TCGTCCCCAC CATTCAGCAA TCGAGCCTGG TCGGCGAGAT CTACCGTTAT CGGCTGGTCG GGCCGCCCAA TTTCGGGCTG ACCAATCTGC GCACGCTGCA GGACTATGTC GTGACGCGGC GGCTGATGAC CATTCCCGGC GTGGTGCAGG TCAACGCCTG GGGCGGCACC ACCAAGCAAT TCAATGTCGA CGCCGATCTG CAGAAGCTCG AATCCTACAA CATCACAGTG CCGCAGCTGG TGGCTGCGCT CGGCAACGCC AACGTCAATG TCGGCGGCCG CGAGATCACC ATCGGCCAGC AATCGGTCAA TATTCGCGGC ATCGGGCTGA TCGATTCGGG CGGCACCGAC GACATCACCA AGGGGAATCG CGTCGCGGAT ATCGAGAACA TCGTGCTGAC GCAGTCCGCG GGACTGCCGA TCCAGATCAA GGACGTGGCC AGGGTCTCGG TCGGCTACGT TACCCGACTC GGCATCGCCG GCAAGGACAA GGATGACGAT ATCGCGGCCG CCATCGTCGT GATGGGGCGC ACCCAGCACA CCAACGACAT CATCCCGAAA GTGCAGGCCG AGGTCGCCCG GATCAATTCC GACGGCACGC TGCCGGCCGG CGTGCACATC GTGCCGTATT ACGACCGCAG CGCGCTGGTC GGCGTCACCA CGCATACGGT GCTGCACAAT CTCGTGTTCG GCTGCCTGCT GGTGTTTGCG ATCCAATGGA TCTTCCTCGG CGATCTCCGC AGCGCGCTGA TCGTCAGCGC CAACATTCCG TTCGCGCTGT TCTTCGCCAT CATCATCCTG GTGCTGCGCG ACGAGGATGC CAACCTGCTC TCGCTCGGCG CGGTCGATTT CGGCATCATC GTCGACTCCG CGGTCATCAT GATGGAGAAC GTGTTCCGCA ATCTGCAGTC GCCACCGGAG GCGCGGCAGC TGACGCTGCA GAGGCTGTCC GAGGGTTATT GGGGTGTCGA TCCCACCGTC CCCACGCATG GTCATCCGGC GGCGGTCCGT TGGAGCGAGC GGCTGCGCAT GATCTATGTC AGCGCGCTGC AGGTCGACAA GGCCGTGTTC TTCACCGCAG CGATCACGGT GACCGCGTTC GTGCCGCTGT TCACGATGCA GGGTGTCGAG GGCCAGATTT TCGGCCCGAT GGCGCGGACC TATGGCTATG CGCTGGCCGG CGCGCTGCTC GCAACCTTTA CCGTCACGCC TGTTCTCGCC GCGCTGCTGT TGCCGCGGCA CGTCGAGGAG GTCGAGACGG TGATCGTGCG TGCCCTCCGC CGCGTCTACA CGCCTGTGCT CGCCTGGTCG CAGGCGCATG TCAGGCTCGC GGTCGCGGCC GGCTTGGCCT TCCTCATGCT CAGCCTGCTG GCCGCAAGCC AGCTGGGCAG CGAATTCCTG CCAGCGCTCG AAGAGGGCAA TTTCTGGATC CGCGCGTCCA TGCCGCCGAC CATCTCGCTC GATGCCGGCA CCGCCGCCAC CCGTAAAATG CGCGAGATTC TGCTGCGCCA CCCCGAGATC ATCACCGTGG TGTCGCAGCA CGGCCGTCCC GACAATGGCA GCGACGCCTC GCCCTTCTCC AATGTCGAAC TGTTCGCCCC GATCAAGCCG TTCGACGAAT GGCCGGCCGG CCTGACCAAG GAGAAGCTGA CCGAACAGTT GCAGCAGGAA TTCGCAGCCG AGCTGCCCGG CATCAGCTTC AACTTCTCGC AATACATCCA GGACAATGTC GAAGAGGCGC TCTCCGGCGT GAAGGGCGCC AATTCGGTCA AGGTGATCGG TCCCAATCTC GAGGTGCTGG AGCAGATTGC GACCCACGTG ATGGAGGAAA TGGCGAAGGT GAACGGCGTC GCCGATCTCG GCGTCTTCCA CCTGGTGGGG CAGCCCAACC TCGACATCAA GGTCAACCGC GAGAAGGCGG CGCGCTACGG GCTGAATACC GGAGATGTCA CCACGGTGAT CCAGGCCGCG CTCGGCGGCA CCAACGCGAC GACCGTGCTC GAAGGTGACC GAAGCTTCGC CGTCGCCGTC CGGCTCGATG CGCGCTTCCG CAGCAGCATC GATGCGGTGA AGGACATCAA GGTCGCCTAT GTGACACCAT CCGGCACCAA CGCCTATATT CCGTTGTCGG AGCTTGCAGA CATCTCGCTC GATACCGGCG CACTTTTCAT CTATCGCGAA CTCAGCCAGC GCTACATCCC GATCAAGTTC TCGGTGCGCG GCCGCGATCT CGGCGGCACG GTCAAGGAGG CGCAGGAGCG GATCGCGCGG GCCGTCCCGC TGCCGGCCGG CTACCGCATC GTCTGGTCGG GGGAGTTCGA CAATCTCGAA GCTGCGAAGG CGCGCCTTCT GGTCGTGGTA CCTATCACGC TGCTGCTGAT CTTCGTGCTG CTCTACAGCC TGTTCAACTC GCTGCGCGAC AGCCTGCTGG CGCTGGCCGG CATTCCCTTC GCGATCGGCG GCGGCCTGAT CGCGCTGTGG ATCGCCGGGC TCGCCTTCTC GATCTCGGCT GCGATCGGAT TCATCTCGCT GTTCGGCGTG GCCGTCATGG ACGGCATTCT GAACATCACC TATTTCCGCG AGCTCCGCGC CACCGGCCGC AGTGTCGCCG AGGCCGTGTT CCACAGCTCC GAGCAACGCA TGCGGCCGAT GCTGATGACC GCGCTGTCCG CGGGCGTCGG TCTGTTTCCG GCCGCCCTCT CCCATGGCAT CGGCAGCCAG GTCCAGCGGC CGCTCGCCAC CGTCGTCGTC GGCGGCATGT TCATCGGCCC GCTGCTGCTG CTGATCGTCG CGCCGGCGCT GCGCCGCATC TTCCTGGCGC ACGATCCCAC GACGGCCCCG ATCGACGACG GCACCGCGGC CTCTCCAGAA CCTGCTGAAT AG
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Protein sequence | MVKSLIQFGL TRSAIVVLGL LVFCAAGIAA FLRLNIEAYP NPAPVILEIT AQASGLSAEE MEKYYTIPME VGLYPTPGVV NIRSTSFYGL AFVRVTFKYG VDYYFALTQA ANSIQQNIQL PGNLVPTIQQ SSLVGEIYRY RLVGPPNFGL TNLRTLQDYV VTRRLMTIPG VVQVNAWGGT TKQFNVDADL QKLESYNITV PQLVAALGNA NVNVGGREIT IGQQSVNIRG IGLIDSGGTD DITKGNRVAD IENIVLTQSA GLPIQIKDVA RVSVGYVTRL GIAGKDKDDD IAAAIVVMGR TQHTNDIIPK VQAEVARINS DGTLPAGVHI VPYYDRSALV GVTTHTVLHN LVFGCLLVFA IQWIFLGDLR SALIVSANIP FALFFAIIIL VLRDEDANLL SLGAVDFGII VDSAVIMMEN VFRNLQSPPE ARQLTLQRLS EGYWGVDPTV PTHGHPAAVR WSERLRMIYV SALQVDKAVF FTAAITVTAF VPLFTMQGVE GQIFGPMART YGYALAGALL ATFTVTPVLA ALLLPRHVEE VETVIVRALR RVYTPVLAWS QAHVRLAVAA GLAFLMLSLL AASQLGSEFL PALEEGNFWI RASMPPTISL DAGTAATRKM REILLRHPEI ITVVSQHGRP DNGSDASPFS NVELFAPIKP FDEWPAGLTK EKLTEQLQQE FAAELPGISF NFSQYIQDNV EEALSGVKGA NSVKVIGPNL EVLEQIATHV MEEMAKVNGV ADLGVFHLVG QPNLDIKVNR EKAARYGLNT GDVTTVIQAA LGGTNATTVL EGDRSFAVAV RLDARFRSSI DAVKDIKVAY VTPSGTNAYI PLSELADISL DTGALFIYRE LSQRYIPIKF SVRGRDLGGT VKEAQERIAR AVPLPAGYRI VWSGEFDNLE AAKARLLVVV PITLLLIFVL LYSLFNSLRD SLLALAGIPF AIGGGLIALW IAGLAFSISA AIGFISLFGV AVMDGILNIT YFRELRATGR SVAEAVFHSS EQRMRPMLMT ALSAGVGLFP AALSHGIGSQ VQRPLATVVV GGMFIGPLLL LIVAPALRRI FLAHDPTTAP IDDGTAASPE PAE
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