Gene BBta_3469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3469 
Symbol 
ID5155218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3620714 
End bp3623965 
Gene Length3252 bp 
Protein Length1083 aa 
Translation table11 
GC content64% 
IMG OID640558321 
Productputative cation efflux system protein 
Protein accessionYP_001239468 
Protein GI148254883 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3696] Putative silver efflux pump 
TIGRFAM ID[TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.806114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTCAAAA GCCTCATCCA GTTCGGCCTC ACCCGCAGCG CCATCGTCGT GCTGGGCCTG 
CTCGTGTTCT GCGCAGCCGG CATCGCCGCG TTCCTCAGAT TGAACATCGA AGCCTACCCC
AATCCTGCAC CGGTGATCCT GGAGATCACG GCGCAGGCGT CGGGCCTGTC GGCAGAGGAG
ATGGAGAAGT ACTATACGAT CCCGATGGAG GTCGGGCTCT ATCCGACCCC GGGCGTCGTC
AACATCCGCT CGACCTCGTT CTACGGCCTC GCTTTCGTTC GCGTCACGTT CAAATACGGT
GTCGACTATT ATTTCGCTCT GACGCAGGCC GCCAACAGCA TCCAGCAGAA TATCCAGCTG
CCCGGCAATC TCGTCCCCAC CATTCAGCAA TCGAGCCTGG TCGGCGAGAT CTACCGTTAT
CGGCTGGTCG GGCCGCCCAA TTTCGGGCTG ACCAATCTGC GCACGCTGCA GGACTATGTC
GTGACGCGGC GGCTGATGAC CATTCCCGGC GTGGTGCAGG TCAACGCCTG GGGCGGCACC
ACCAAGCAAT TCAATGTCGA CGCCGATCTG CAGAAGCTCG AATCCTACAA CATCACAGTG
CCGCAGCTGG TGGCTGCGCT CGGCAACGCC AACGTCAATG TCGGCGGCCG CGAGATCACC
ATCGGCCAGC AATCGGTCAA TATTCGCGGC ATCGGGCTGA TCGATTCGGG CGGCACCGAC
GACATCACCA AGGGGAATCG CGTCGCGGAT ATCGAGAACA TCGTGCTGAC GCAGTCCGCG
GGACTGCCGA TCCAGATCAA GGACGTGGCC AGGGTCTCGG TCGGCTACGT TACCCGACTC
GGCATCGCCG GCAAGGACAA GGATGACGAT ATCGCGGCCG CCATCGTCGT GATGGGGCGC
ACCCAGCACA CCAACGACAT CATCCCGAAA GTGCAGGCCG AGGTCGCCCG GATCAATTCC
GACGGCACGC TGCCGGCCGG CGTGCACATC GTGCCGTATT ACGACCGCAG CGCGCTGGTC
GGCGTCACCA CGCATACGGT GCTGCACAAT CTCGTGTTCG GCTGCCTGCT GGTGTTTGCG
ATCCAATGGA TCTTCCTCGG CGATCTCCGC AGCGCGCTGA TCGTCAGCGC CAACATTCCG
TTCGCGCTGT TCTTCGCCAT CATCATCCTG GTGCTGCGCG ACGAGGATGC CAACCTGCTC
TCGCTCGGCG CGGTCGATTT CGGCATCATC GTCGACTCCG CGGTCATCAT GATGGAGAAC
GTGTTCCGCA ATCTGCAGTC GCCACCGGAG GCGCGGCAGC TGACGCTGCA GAGGCTGTCC
GAGGGTTATT GGGGTGTCGA TCCCACCGTC CCCACGCATG GTCATCCGGC GGCGGTCCGT
TGGAGCGAGC GGCTGCGCAT GATCTATGTC AGCGCGCTGC AGGTCGACAA GGCCGTGTTC
TTCACCGCAG CGATCACGGT GACCGCGTTC GTGCCGCTGT TCACGATGCA GGGTGTCGAG
GGCCAGATTT TCGGCCCGAT GGCGCGGACC TATGGCTATG CGCTGGCCGG CGCGCTGCTC
GCAACCTTTA CCGTCACGCC TGTTCTCGCC GCGCTGCTGT TGCCGCGGCA CGTCGAGGAG
GTCGAGACGG TGATCGTGCG TGCCCTCCGC CGCGTCTACA CGCCTGTGCT CGCCTGGTCG
CAGGCGCATG TCAGGCTCGC GGTCGCGGCC GGCTTGGCCT TCCTCATGCT CAGCCTGCTG
GCCGCAAGCC AGCTGGGCAG CGAATTCCTG CCAGCGCTCG AAGAGGGCAA TTTCTGGATC
CGCGCGTCCA TGCCGCCGAC CATCTCGCTC GATGCCGGCA CCGCCGCCAC CCGTAAAATG
CGCGAGATTC TGCTGCGCCA CCCCGAGATC ATCACCGTGG TGTCGCAGCA CGGCCGTCCC
GACAATGGCA GCGACGCCTC GCCCTTCTCC AATGTCGAAC TGTTCGCCCC GATCAAGCCG
TTCGACGAAT GGCCGGCCGG CCTGACCAAG GAGAAGCTGA CCGAACAGTT GCAGCAGGAA
TTCGCAGCCG AGCTGCCCGG CATCAGCTTC AACTTCTCGC AATACATCCA GGACAATGTC
GAAGAGGCGC TCTCCGGCGT GAAGGGCGCC AATTCGGTCA AGGTGATCGG TCCCAATCTC
GAGGTGCTGG AGCAGATTGC GACCCACGTG ATGGAGGAAA TGGCGAAGGT GAACGGCGTC
GCCGATCTCG GCGTCTTCCA CCTGGTGGGG CAGCCCAACC TCGACATCAA GGTCAACCGC
GAGAAGGCGG CGCGCTACGG GCTGAATACC GGAGATGTCA CCACGGTGAT CCAGGCCGCG
CTCGGCGGCA CCAACGCGAC GACCGTGCTC GAAGGTGACC GAAGCTTCGC CGTCGCCGTC
CGGCTCGATG CGCGCTTCCG CAGCAGCATC GATGCGGTGA AGGACATCAA GGTCGCCTAT
GTGACACCAT CCGGCACCAA CGCCTATATT CCGTTGTCGG AGCTTGCAGA CATCTCGCTC
GATACCGGCG CACTTTTCAT CTATCGCGAA CTCAGCCAGC GCTACATCCC GATCAAGTTC
TCGGTGCGCG GCCGCGATCT CGGCGGCACG GTCAAGGAGG CGCAGGAGCG GATCGCGCGG
GCCGTCCCGC TGCCGGCCGG CTACCGCATC GTCTGGTCGG GGGAGTTCGA CAATCTCGAA
GCTGCGAAGG CGCGCCTTCT GGTCGTGGTA CCTATCACGC TGCTGCTGAT CTTCGTGCTG
CTCTACAGCC TGTTCAACTC GCTGCGCGAC AGCCTGCTGG CGCTGGCCGG CATTCCCTTC
GCGATCGGCG GCGGCCTGAT CGCGCTGTGG ATCGCCGGGC TCGCCTTCTC GATCTCGGCT
GCGATCGGAT TCATCTCGCT GTTCGGCGTG GCCGTCATGG ACGGCATTCT GAACATCACC
TATTTCCGCG AGCTCCGCGC CACCGGCCGC AGTGTCGCCG AGGCCGTGTT CCACAGCTCC
GAGCAACGCA TGCGGCCGAT GCTGATGACC GCGCTGTCCG CGGGCGTCGG TCTGTTTCCG
GCCGCCCTCT CCCATGGCAT CGGCAGCCAG GTCCAGCGGC CGCTCGCCAC CGTCGTCGTC
GGCGGCATGT TCATCGGCCC GCTGCTGCTG CTGATCGTCG CGCCGGCGCT GCGCCGCATC
TTCCTGGCGC ACGATCCCAC GACGGCCCCG ATCGACGACG GCACCGCGGC CTCTCCAGAA
CCTGCTGAAT AG
 
Protein sequence
MVKSLIQFGL TRSAIVVLGL LVFCAAGIAA FLRLNIEAYP NPAPVILEIT AQASGLSAEE 
MEKYYTIPME VGLYPTPGVV NIRSTSFYGL AFVRVTFKYG VDYYFALTQA ANSIQQNIQL
PGNLVPTIQQ SSLVGEIYRY RLVGPPNFGL TNLRTLQDYV VTRRLMTIPG VVQVNAWGGT
TKQFNVDADL QKLESYNITV PQLVAALGNA NVNVGGREIT IGQQSVNIRG IGLIDSGGTD
DITKGNRVAD IENIVLTQSA GLPIQIKDVA RVSVGYVTRL GIAGKDKDDD IAAAIVVMGR
TQHTNDIIPK VQAEVARINS DGTLPAGVHI VPYYDRSALV GVTTHTVLHN LVFGCLLVFA
IQWIFLGDLR SALIVSANIP FALFFAIIIL VLRDEDANLL SLGAVDFGII VDSAVIMMEN
VFRNLQSPPE ARQLTLQRLS EGYWGVDPTV PTHGHPAAVR WSERLRMIYV SALQVDKAVF
FTAAITVTAF VPLFTMQGVE GQIFGPMART YGYALAGALL ATFTVTPVLA ALLLPRHVEE
VETVIVRALR RVYTPVLAWS QAHVRLAVAA GLAFLMLSLL AASQLGSEFL PALEEGNFWI
RASMPPTISL DAGTAATRKM REILLRHPEI ITVVSQHGRP DNGSDASPFS NVELFAPIKP
FDEWPAGLTK EKLTEQLQQE FAAELPGISF NFSQYIQDNV EEALSGVKGA NSVKVIGPNL
EVLEQIATHV MEEMAKVNGV ADLGVFHLVG QPNLDIKVNR EKAARYGLNT GDVTTVIQAA
LGGTNATTVL EGDRSFAVAV RLDARFRSSI DAVKDIKVAY VTPSGTNAYI PLSELADISL
DTGALFIYRE LSQRYIPIKF SVRGRDLGGT VKEAQERIAR AVPLPAGYRI VWSGEFDNLE
AAKARLLVVV PITLLLIFVL LYSLFNSLRD SLLALAGIPF AIGGGLIALW IAGLAFSISA
AIGFISLFGV AVMDGILNIT YFRELRATGR SVAEAVFHSS EQRMRPMLMT ALSAGVGLFP
AALSHGIGSQ VQRPLATVVV GGMFIGPLLL LIVAPALRRI FLAHDPTTAP IDDGTAASPE
PAE