| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3456 |
|---|
| Symbol | dusA |
|---|
| ID | 5155558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3604946 |
|---|
| End bp | 3605902 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640558308 |
|---|
| Product | tRNA-dihydrouridine synthase A |
|---|
| Protein accession | YP_001239455 |
|---|
| Protein GI | 148254870 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0042] tRNA-dihydrouridine synthase |
|---|
| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.62577 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.435546 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGA CCGACCGGCA CTGCCGGGTG TTTCACCGCC TGCTGTCGCG GCGGGCGCTG
CTCTATACCG AGATGGTCAC CACCGGCGCC GTCATTCATG GCGATCGGAA GCGGCTGCTC
GGCTTCGATG CGAGCGAGCA TCCGGTGGCG CTGCAGCTTG GCGGGTCCGA TCCGGCCGAT
CTCGCGACCT CGGCGCGGAT CGGCGAAGAC TTCGGTTATG ACGAAATCAA TCTCAATGTC
GGCTGTCCTT CCGACCGGGT CAAGGATGGC CGCTTCGGCG CCTGCCTGAT GGCGGAGCCT
GAGCTCGTCG CCGCCTGCGT CGCGGCGATG AAGCGCGCGG TGCGCATTCC CGTCACGGTG
AAATGCCGCA TCGGGATCGA TGACCAGGAT CCGGAGCTCG CGCTCGATAC GCTGGCGGAT
GCGGTGGTCG ATGCGGGCGC CGACGCGCTG ATCGTGCATG CGCGCAAGGC CTGGCTGAAC
GGCCTGTCGC CCAAGGAGAA CCGCGAGATC CCGCCGCTCG ATTACGACCG GGTCTATCGG
CTGAAGGCGA GGCTGCCGAA CGTGCCGGTC ATCATCAATG GCGGCATCAC CAGCATCGCG
GCGGCGCAAG CGCATCTGGC TCACGTCGAT GGCGTGATGC TCGGGCGCGC CGCCTATCAG
GAACCGTGGC AGTTGCTCGA CGTCGATCCC ATGCTGTTCG GCGACGCCGC GCCGCATCGG
AGCATGAAAG ACGCGTTGGC GGCGCTCGAG CCCTATATTG AACGCCAACT CCGGGAGGGC
TCGCGGCTGC ACGCGATCAC GCGGCATCTG GTCGGCGCCT ATCACGCGGT CCCGGGGGCG
CGCGCCTTTC GCCGTCATCT CGCCGAGCGC GGCGTCAAGC CGGATGCCGG GATCGAGGTG
CTGCGCGAGG CGGTGGCGAT GGTCGAGGAG CGTGCGCCGG CGGCCGCGTT CGCCTGA
|
|---|
| Protein sequence | MDWTDRHCRV FHRLLSRRAL LYTEMVTTGA VIHGDRKRLL GFDASEHPVA LQLGGSDPAD
LATSARIGED FGYDEINLNV GCPSDRVKDG RFGACLMAEP ELVAACVAAM KRAVRIPVTV
KCRIGIDDQD PELALDTLAD AVVDAGADAL IVHARKAWLN GLSPKENREI PPLDYDRVYR
LKARLPNVPV IINGGITSIA AAQAHLAHVD GVMLGRAAYQ EPWQLLDVDP MLFGDAAPHR
SMKDALAALE PYIERQLREG SRLHAITRHL VGAYHAVPGA RAFRRHLAER GVKPDAGIEV
LREAVAMVEE RAPAAAFA
|
|---|
| |