Gene BBta_3455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3455 
Symbol 
ID5155557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3603649 
End bp3604737 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content60% 
IMG OID640558307 
Productputative integrase/recombinase 
Protein accessionYP_001239454 
Protein GI148254869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.375642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.439237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACGA TCACCGCTCG CAAGCGCAAA GACGGGACCA CCGCCCATCT GGCCCAGGTC 
CTCATCAAGC GCGGCGGGGC CATTCTGCAC CGGGAGGCTC GAACATTCGA CCGGAAGCAG
GCGGCCGCAG CCTGGCTGGA GAGACGGGAA AAGGAGTTGG CGGCACCAGG AGGGCTCGAA
CAGGAAAAAG GTCTCGACCC CGTCCTCTCC GACGTCATCG AGCGCTACGT TTCCGAGTCC
AAGAAGGAGA TCGGGCGCAC CAAGGCGCAG GTCCTGAACG CAATCAAAGG CTATGAGATT
GCCCAGCGAA GGTGCTCAAC GATCGGTAGC ACCGATCTCG TGGAATTCGC CAACCAGCTG
GTAAGCAAAG TCCAACCCCA GACCGTCAGC AACTATCTCT CACACCTCGC GGCCATCTTC
GCGATCGCAC GCCCGGCTTG GGGATATCCG CTCGACCAGG CTGCCATGAA GGACGCCTTC
GTCGTCGCCA AGAGACTGGG GATCACGAGC AAGAGCCGTA CACGGGAGCG GCGCCCGAGC
TTGGCGGAGC TCGATCTGCT GATGCAGCAT TTCGGCGAAC GGCAGCAAAG GCGGCCCTCG
TCTGTGCCGA TGCAGAAGGT CATTGCATTC GCAATCTTCT CAACGCGACG TCTTGAGGAA
ATCACGCGGC TGAGGCGAGC CGACCTCGAT GAGGTCGGAA GCAAGATTTT GGTGCGTGAC
ATGAAAAACC CTGGCGAGAA GCTCGGGAAC GACGTCTGGT GCGATCTCCC TGCTGAGGCT
CTCCACGTCG CGCAATCCAT GCCTTCGGAT ACCGATGAGA TCTTTCCCTA TACGACCGAC
GCAATCGGCA TGGGATTTAC GCGCGCGTGC CAACTGCTCG GCATCGTGGA TCTGCATTTC
CACGATCTCC GCCACGACGG CGTTTCCAGG CTATTTGAAA TGGGCCACAA CGTTCCCCAA
GTCGCAGCCG TCTCAGGCCA TCGTTCCTGG TCGAGCCTGA AGCGATACAC GCATCTCCGG
CAGACAGGGA ACAAGTATGA AGGCTGGAAG TGGCTGGAGG TCGTTACAGT GAAGACGGCT
CCCGGATGA
 
Protein sequence
MGTITARKRK DGTTAHLAQV LIKRGGAILH REARTFDRKQ AAAAWLERRE KELAAPGGLE 
QEKGLDPVLS DVIERYVSES KKEIGRTKAQ VLNAIKGYEI AQRRCSTIGS TDLVEFANQL
VSKVQPQTVS NYLSHLAAIF AIARPAWGYP LDQAAMKDAF VVAKRLGITS KSRTRERRPS
LAELDLLMQH FGERQQRRPS SVPMQKVIAF AIFSTRRLEE ITRLRRADLD EVGSKILVRD
MKNPGEKLGN DVWCDLPAEA LHVAQSMPSD TDEIFPYTTD AIGMGFTRAC QLLGIVDLHF
HDLRHDGVSR LFEMGHNVPQ VAAVSGHRSW SSLKRYTHLR QTGNKYEGWK WLEVVTVKTA
PG