| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3454 |
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| Symbol | trkD |
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| ID | 5155958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3601534 |
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| End bp | 3603369 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640558306 |
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| Product | Kup family low affinity potassium transporter |
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| Protein accession | YP_001239453 |
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| Protein GI | 148254868 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3158] K+ transporter |
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| TIGRFAM ID | [TIGR00794] potassium uptake protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.565497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGCTCC GGCCGCTGAT GGTTGGCGCG CTGGGCGTCG TCTATGGCGA CATCGGCACC
AGCCCGCTCT ACACGATGAA GACGGCGTTG GAATGGGCGG GAGGCGCCGA CGCCGAGACC
GCGCTCGGCA TGCTGTCGCT GATCGTCTGG ACGCTCCTGA TCACCACCTC GATCAAATAC
GTCGCCGTCG TGATGCGGGC CGACAATGAC GGCGAAGGCG GCATTCTGGC GTTGATGTCG
CTGCTGGGGA TCAAGCACGG CGAGCGGCTC GGGGTGATCG CGATGGGCTT GATCGGTGCA
GCCTTGCTCT ATGGCGACGG CGCCATCACG CCTGCGATCT CGGTGCTGAG CGCGTTGGAA
GGACTGAAAA GCCCGCTGCC GCAGATCAGC CCCTATATCG TGACGCTGTC CGCGATCATC
CTGGTTGGTC TGTTTGCGTT ACAGGCCCAG GGCACCGACC GGATTGGCAA ACTGTTCGGC
CCTGTGATGA TCGCCTGGTT CATCGTCATC GGTATCCTCG GTTTGTTTGG TATCCTGCGT
CACCCCTCGG TGCTGGCGGC GCTCGATCCG CGCCATGGGC TGTCCTATCT GTTCAGTCAT
GGCATGACCG GCTTCCTGGT GCTCGGCGCC GTGTTCCTGT GCGCCACCGG AGCCGAGGCG
CTCTATGCCG ACATGGGGCA TTTCGGCGCC CGCCCGATCC GCTTCGCCTG GTATGGGCTG
GTGTTGCCCT GCCTGATCCT GAACTACGCC GGCCAGACCG CTGTCGTGGT CGATGCTGCG
CTGGGCCAGG AGCCAAATCC CTTCTTCGCC CTGTGCCCGG CCGCGCTCCA GCTGCCGCTC
GTTGCGCTGG CCACGGTCGC GACCATCATC GCCAGCCAGG CGATCATCAG TGGCGCGTTC
TCGATGACCC GGCAGGCGAT ACAGCTTGGC CTGTGTCCGC GCCTGAACAT CGCGCAGACA
TCGGCCACCG GCTACGGCCA GATCTATATC GGTTTCGTCA ATTGGACGTT GATGGCGCTG
ACTCTGGGGC TGACCCTCGG CTTCCGCTCG TCCGACAATC TGGCGGCAGC GTTCGGCATC
GCGGTGTCTC TGACCATGCT GCTGACTTCG ATTCTGATGT TTCTGACCAT GCGCGAGATC
TGGAAGTGGA ATCTGGCGGC GAGTCTTCTG ACCGCGGGCC TGTTTGTCGT GGTCGACATG
AGCTTCGTCA GCGCCAATTT GATGAAGGTG CTGGAAGGGG GCTGGTTCCC CCTGGTCGTC
GCCGCCGTCA TCTTCTTCCT GATGATGACA TGGCATCAGG GCCGTGATCT CCTGGTCAAG
AAGCTGGAGC GCGACACCCT TCCGCTCGCG ACCTTCATCG CGCAGGTCGG CGCCAAGACG
CGGGTCCCCG GCACCGCGGT CTACATGACC AGCCGGCTCG ATGTCGTCCC CGTACCGCTG
CTCCACAATC TCAAGCACAA CAAGGTGCTG CACGATCGCA TCGTGCTCCT GCGCGTGGTC
ACCGCGAGCA CGCCGCGCGT CGCGCCAGAT CTGCGCATCG ACGTCGAGCA CGTCGGGAGC
AATTTTCACA CGATGACGGT GCGCTACGGC TTCATGGAGC AGCCGGATGT CCCTGAAGCT
CTCGATCAGT GCCGCCAGCG CGGGCTGATC TTCAACATGA TGGAGACGTC GTTCTTCGTC
GGACGGGTCA AGATCGTCGC CGAGCGGCGG TCGCGATTTG CTGCCTTCCA GGCCCATTTG
TTCGAGATCA TGCATCGCAA CGCCATGGCG GCCACCGAAT TCTTCCGCAT CCCTCCGAAC
CGGGTCATCG AGCTGGGCGG ACAGGTGGAG ATCTGA
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| Protein sequence | MGLRPLMVGA LGVVYGDIGT SPLYTMKTAL EWAGGADAET ALGMLSLIVW TLLITTSIKY
VAVVMRADND GEGGILALMS LLGIKHGERL GVIAMGLIGA ALLYGDGAIT PAISVLSALE
GLKSPLPQIS PYIVTLSAII LVGLFALQAQ GTDRIGKLFG PVMIAWFIVI GILGLFGILR
HPSVLAALDP RHGLSYLFSH GMTGFLVLGA VFLCATGAEA LYADMGHFGA RPIRFAWYGL
VLPCLILNYA GQTAVVVDAA LGQEPNPFFA LCPAALQLPL VALATVATII ASQAIISGAF
SMTRQAIQLG LCPRLNIAQT SATGYGQIYI GFVNWTLMAL TLGLTLGFRS SDNLAAAFGI
AVSLTMLLTS ILMFLTMREI WKWNLAASLL TAGLFVVVDM SFVSANLMKV LEGGWFPLVV
AAVIFFLMMT WHQGRDLLVK KLERDTLPLA TFIAQVGAKT RVPGTAVYMT SRLDVVPVPL
LHNLKHNKVL HDRIVLLRVV TASTPRVAPD LRIDVEHVGS NFHTMTVRYG FMEQPDVPEA
LDQCRQRGLI FNMMETSFFV GRVKIVAERR SRFAAFQAHL FEIMHRNAMA ATEFFRIPPN
RVIELGGQVE I
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