Gene BBta_3421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3421 
Symbol 
ID5152416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3569116 
End bp3570177 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content65% 
IMG OID640558274 
Producthypothetical protein 
Protein accessionYP_001239421 
Protein GI148254836 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.304337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC TGTCCCAACT GCTCCAGCAA GGCAGCGCGC ATGCCTGGCT GTTCGTACCC 
AGCGCCATCC TGCTTGGCGC CCTGCACGGC CTGGAGCCCG GTCATTCCAA GACCATGATG
GCCGCGTTCA TCGTCGCGAT CCGGGGCACC GTGTTGCAGG CGGTGCTGCT CGGCCTGTCG
GCGACCATCT CGCATACGGC GATCGTATGG GTGATTGCGC TGGCCGGCCT TCACTTCGGC
CAGGAGCTGT CGGGCGAGCG CAGCGAAGCC TACCTTCAGC TGATCTCGGC GATCGTCATC
ATCGGCATTG CCATCTGGAT GATCTGGCGC ACATGGCGAG AGCAGAATGG AGCGCATCAC
CATCATCATA ACGATGAGCC GCAGTCGGTC GTGGTCGGCG GTCGGTCGCT CTCCGTCGAG
ATCTTCGAGG ACGGCGTTCC GCCGCGCTGG CGCATCCGCG CCGAGACGGG AGCTCTGCCG
GCCGCCGAAG CGCTTCATCT GACGACGGTG CGTCCGGACG GCGCCGAGCA GGGCTTCAGC
TTCCGCCTCG GGAGCGGCCA TCTGGAGAGC ATCGAGGAGA TCCCGGAACC ACATGCATTC
AAGGCGCGCA TCGGCCTTGC CGGCGAGACC GCGGAGATCC TGTTCGAGGA ACATGCTCAC
GATCACATGA ACCTCGGCGA TGAGGACGAT GCCCACGCGC GCGCTCATGC CGCCGACATT
CGCAAGCGTT TTGCCGGCCG CACCGTGACA ACGGCCCAGA TCGTTCTGTT CGGCCTGACC
GGCGGCTTGA TCCCCTGCCC GGCCGCCATC ACTGTCCTGC TGTTGTGCAT TCAGCTGAAG
CAGTTCAGCC TGGGCTTCGT GCTGGTTCTC TGCTTCGGCA TCGGCTTGGC CATCACCATG
GTATCTGCCG GAGTGCTGGC TGCCCTCAGC CTGCGGCATG TCGAGCGCCA CTGGTCCGGC
TTCAGCCGCT TCGCCCACCG CGCGCCCTAC GTCTCGGCCG CGCTGATCGT GCTGGTCGGG
CTGTATACGG GTTGGCTGGG CCTGCACGAG GTCATGACGT GA
 
Protein sequence
MTDLSQLLQQ GSAHAWLFVP SAILLGALHG LEPGHSKTMM AAFIVAIRGT VLQAVLLGLS 
ATISHTAIVW VIALAGLHFG QELSGERSEA YLQLISAIVI IGIAIWMIWR TWREQNGAHH
HHHNDEPQSV VVGGRSLSVE IFEDGVPPRW RIRAETGALP AAEALHLTTV RPDGAEQGFS
FRLGSGHLES IEEIPEPHAF KARIGLAGET AEILFEEHAH DHMNLGDEDD AHARAHAADI
RKRFAGRTVT TAQIVLFGLT GGLIPCPAAI TVLLLCIQLK QFSLGFVLVL CFGIGLAITM
VSAGVLAALS LRHVERHWSG FSRFAHRAPY VSAALIVLVG LYTGWLGLHE VMT