Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3420 |
Symbol | |
ID | 5152415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3568430 |
End bp | 3569023 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640558273 |
Product | cytochrome b561 family protein |
Protein accession | YP_001239420 |
Protein GI | 148254835 |
COG category | [C] Energy production and conversion |
COG ID | [COG3038] Cytochrome B561 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00251628 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTGA TCAACTCGGC AAAAGGCTAC GGCGCGGTTC CTCAGGCGTT GCATTGGCTG ACGGCGCTCC TTGTTGCAAT CACCTGGGCG CTCGGCGTTC TCGGCGAGGA TCTGCCGAGT GGCGGAGCGC GCGCGTCCGC CCTGTTCATT CATATTGCGG CGGGCATCGC AATCCTGGCG ATGCTCGCAG TGCGGTTGAC GTGGCGGTTG GTCGACCCGG CGCCACCGAC CGAAGAGACC GAATTCGCCA CATGGATGGG AAAATGGCAG GATCCGGCCG CCCGGTTCGC GCACTATCTC CTGTACGCCC TCCTCTTCGC CGTGCCCGTC GCTGGGATCG TCCTGCAATT TGCGCGCGGT GACGCGCTGC CGGTCTTTGG AATGACGGAG ATTGCATCGC CCTGGCCCAG GGATCGCGCC TTCGCCCACA ATGTGAAGGA GGTGCATGAG ATCCTTGCTC ATGCCCTCGT TGTCGTTGCC GCGATGCATG CGGCCGCGGC CCTGATCCAT CATTGGATCT TCCGCGATCG TACCTTGCTT CGAATGCTGC CGCACTTCTG GAAGCCGTCG AGCACGCCTG GTGCAGGGGA ATGA
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Protein sequence | MQLINSAKGY GAVPQALHWL TALLVAITWA LGVLGEDLPS GGARASALFI HIAAGIAILA MLAVRLTWRL VDPAPPTEET EFATWMGKWQ DPAARFAHYL LYALLFAVPV AGIVLQFARG DALPVFGMTE IASPWPRDRA FAHNVKEVHE ILAHALVVVA AMHAAAALIH HWIFRDRTLL RMLPHFWKPS STPGAGE
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