Gene BBta_3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3418 
Symbol 
ID5152413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3565987 
End bp3566682 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content60% 
IMG OID640558271 
Producthypothetical protein 
Protein accessionYP_001239418 
Protein GI148254833 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.258181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGCCA CTCCTCACAT CGAAAAGCAT TTTACTGCCT CAGAGAGCGT CCGTGACGTC 
GTGATCGGGA TGGCAGACGG CTTGACGGTC CCGTTCGCGC TGGCGGCAGG CCTTTCTGCA
GCGGTTACCA ATACGGACGT GATCGTCACT GCCGGATTGG CAGAAGTCGT CGCTGGGGCC
ATCGCGATGG GGCTCGGCGG GTATCTCGCC GCTCGCACCG ACGCGGAGCA TTACGCCGCG
GAAGAGCAGA GGGAGCATCA TGAAATCAAG GTGCTGCACG AGCGTGAGAT CGAGGAAGTC
GAGCACATCT TCCGCCAATA CGGCCTGGAC GCTGATACGC TTCAATCCGT AGTCGGCGCG
ATCGCCTCGC ATCCGCAGCG TTGGGTCGAC TTCATGATGC GCTTCGAATT GGGATTGGAG
CGCCCGGACC CAAAGCGCGC TCCGATCAGC GCCGCCACAA TTGGCGGCTC CTATGTGGTC
GGCGGCTTGA TTCCACTCGT GCCCTATATA TTCACGCAGA ATATCGGAAC CGCACTGCAA
ATCTCGGTCG CGGCCACCGG CGTTGCCCTC CTATGCTTCG GAGCCGTCAA AGGACACTTC
ACCGGAGTGA ACAAGAGCAA GTCTGCGATC CAGACGTTGC TCGTAGGAGG ATTGGCCGCT
GGAGCGGCAT ATTGGCTCGC GCACCTCTTC GGATAG
 
Protein sequence
MPATPHIEKH FTASESVRDV VIGMADGLTV PFALAAGLSA AVTNTDVIVT AGLAEVVAGA 
IAMGLGGYLA ARTDAEHYAA EEQREHHEIK VLHEREIEEV EHIFRQYGLD ADTLQSVVGA
IASHPQRWVD FMMRFELGLE RPDPKRAPIS AATIGGSYVV GGLIPLVPYI FTQNIGTALQ
ISVAATGVAL LCFGAVKGHF TGVNKSKSAI QTLLVGGLAA GAAYWLAHLF G