| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3413 |
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| Symbol | cnrA |
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| ID | 5152324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3558202 |
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| End bp | 3561450 |
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| Gene Length | 3249 bp |
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| Protein Length | 1082 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640558267 |
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| Product | RND divalent metal cation efflux transporter CnrA |
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| Protein accession | YP_001239414 |
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| Protein GI | 148254829 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.382082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAC GTATCGTCGC GTTCTCCGTT GATCGCCGAT GGCTGGTGCT GTTCGCGACG
CTCGTCGCCG CAGCGACCGG ATTCTGGTCG CTGACACGGC TGCCGATCGA CGCCGTGCCT
GACGTCACCA ACGTGCAGGT CCAGATCAAC GCTGTCGCGC CGGCGCTGAC GCCGGTCGAG
ATCGAGAAGC AGGTGACGGT CGCGTTGGAG ACGGCCCTGG CAGGCATGCC CGGGCTCGAG
GGGACACGAT CGTTCTCCCG AAACGGTTTC GCGCAGATCA CCGCCGTCTT TGCTGATCGC
ACTAACATCT ATTTCGCGCG ACAGCTGGTG ACCGAGCGCA TCAACGAGGC GAAAGCGAGT
CTGCCGCCCG GAGTCGACGT CCGAATGGGG CCGGTCTCGA CCGGGCTCGG CGAGATCTAC
TGGTGGTCGG TCGAGTACGA GAAGCCCGGC GCGTCTGCGC CGGTCCGGGA CGGAGCGCCC
GGTTGGCAGA CCGACGGCAG CTATATCACG CCGGAAGGCG AGCGGCTGAC GGACGATTTC
CAGCGCACGG TCTACCTGCG GACCGTGCAG GACTGGATCG TGCGCCCGCA GATGAAGACC
GTTCCCGGCG TCGCCGGAGC GGATGCCATC GGCGGCTTCG TCAAACAGTT TCAGGTGCAG
CCGGATCCGG CGAAGCTGAT CGGCTACGGG CTGTCGTTCA AGCAGGTCGT CGACGCGATC
GAGGCGAACA ATGCCAGCCG CGGCGCCAAT TACATCGAGC AGAACGGCGA AGGCTATGTC
GTCCGCGCGG CCGGCCGGGT CGAGAATCTC GAAGACATCG AACAAGTTGT GGTCACGACG
CGCGGCGGCG TTCCCGTGCG AGTCAGGGAT CTGGCGGAGG TCTCGATCGG AAAGGAATTG
CGGACCGGCA GTGCGAGCAT CAACGGACGC GAGGTCGTGC TCGGAACGGC CTTGATGCTG
ATCGGCGGCA ACAGCCGCAC CGTTGCCGCG GCGGCCGATG CGAAGATCAA GCCGATCAGC
AAGACGCTGC CACCCGGCAT CTTTGCCCGG ACCGTTCTCA ACCGCACCGA GCTGGTCGAT
GCGACGATCT ATACGGTCAG CAAGAATCTG GCCGAGGGCG CGCTGCTGGT GATCGCCGTG
CTCTTCCTGC TGCTCGGCAA CTTCCGGGCG GCGCTCGTGA CCGCGTGCGT CATCCCGATC
ACGATGTTGA TGACCGCCAC CGGGATGCTG CAGGGGCGCC TCAGTGCGAA CCTGATGAGC
CTGGGCGCCC TCGATTTCGG CCTCATTGTC GATGGAGCGG TGATCATCGC GGAGAACAGC
CTGCGGCATC TCGCGGAGCG CCAACGCGAG GTCGGCCGTG TGTTGTCGCT GCAAGAGCGC
CTGGAGACCG TCAAGACCTC GACGTCGGAG ATGATCCGGC CTTCGGTCTA CGGCCAGATC
ATCATCATCC TGGTCTATAC GCCCTTGCTC GCGTTCACGG GCGTCGAAGG CAAGACGTTC
GAGCCGATGG CCCTCACCGT CATGATTGCT CTGGCTTTCG CTTTCATCGT CTCGCTGACC
TTCGTCCCGG CGGCTGTGGC GATCACGATC AGCGGTGCGG TCAAGGAAGG TGAGAACGTC
ATCGTCCGCT CGCTCAAGCG TCTCTACGCG CCCGTGCTCT CTGGCGCGGT CGCAAGACCT
CTGCCGGTGA TCGCAGCGGC TGCGCTGCTG TTCGCCGGCG CCGCGCTGCT GTTCATGCGG
CTGGGACAGG AGTTCACGCC CACGCTGGAC GAAAAGAACA TCGTGATGGA GGTCAAGCGC
GTGCCTAGCA CGGCGCTGGC ACAATCGCAG GCGATGCAGC TTCTCATCGA ACGGCAGATC
AGCAAATTGC CTGAGGTCGC GTTCGTGTTC TCGCGGACGG GAACACCGGA TCTCGCCGCC
GATCCGATGC CGCCCAGCGC ATCCGATACA TACATCATCG TCAAGGCGCA GGATGAGTGG
CCCGATCCGT CGGCGACCAA GGAGGACCTG ATCAAGAAGA TCGAGGCCGA GGCCGTCAAG
CTTCCAGGCA ACAAGGTCGG CTTCTCGCAG CCGATCGAGA TGCGCTTCAA CGAGCTGATC
GCCGGTGTCC GCGAGGATCT CGCGGTCAAA GTGTTCGGCG ACGACTTCTC CGAGATGCAG
AGAACCGCGG CTCAGATCTC CGACGTCATC CGGAAGATCG ACGGCGCGGA GAGTGTCAAG
GTCGAAGAGA CCTCAGGTCT GCCCTTTCTC GACATCAAGA TCGACAAGGC CGAGATCGCC
CGGCGCGGGC TCAGTCTCGG AGCCGTTCAG GATCTCGTGC AGACCGCGAT CGGTGGTACG
GATGCCGGCC TGGTGTTCGA GGGCGATCGC CGCTTCCGGA TCGTCGTGCG GCTTTCGGAT
GCTGCACGCA ATGACATTCC GACGCTGGAA GAGCTGCCGG TGCCGCTGCC GCGAGTCAAT
TCTGACGCAC CGACCGCCTC GGTCCCTCTG CGGACGATCG CGACGTTCGA GCAGACCACT
GGCTACAATC AGATCAGCCG AGAGAACGGT AAACGGCGGG TCGTGACCAC AGCGGAAGTC
CGCGGCCGTG ACATCGGATC GCTGGTGGCG GAAGCGCAGG CCAAGGTGGG CGACCAGGTG
CGGCTTCCGC CCGGCAGCTA TCTGGCATGG GGTGGGCAGT TCGAGAATTT CGCAGTGGCC
CGCCAGCGCC TGGCGTTCGT CGTGCCGGCC GTGTTCGTTC TAATCTATTT GCTGCTGTTC
GGCGCGCTCG GCTCTGCGCG GGATGCGTTG CTCGTGTTCA GTGCCGTGCC ACTGGCATTG
ACCGGCGGTA TCGCGGCGCT CTGGCTCCGG GGCATGCCGT TCTCGATCTC GGCCGCGGTC
GGCTTCATTG CCTTGTCAGG TGTCGCGGTG CTGAACGGTC TCGTGATGCT GACGCAGATT
CGCAAGCTGA TCGCTGACGG CGCGCAGGAA CGGGCCGGCA TCATCGAGGG GGCATTGACC
CGTTTCCGTC CTGTTGCAAT GACCGCGCTG GTGGCTTCGT TCGGGTTTGT TCCGATGGCG
CTTGCCACCG GCACCGGCGC CGAGGTGCAG AAGCCGCTCG CTACAGTCGT GATCGGTGGC
CTCTTATCGG CGACCCTTCT CACGCTCGTG GTCCTGCCCG CGCTGTATGC GCGCTTTGCC
GTCCCGCGCC ATCGCCAACG GAGTGACCAA GCGAGGCCCG CGCTCATTCA CGACCGCGCG
GCAGAGTAG
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| Protein sequence | MIERIVAFSV DRRWLVLFAT LVAAATGFWS LTRLPIDAVP DVTNVQVQIN AVAPALTPVE
IEKQVTVALE TALAGMPGLE GTRSFSRNGF AQITAVFADR TNIYFARQLV TERINEAKAS
LPPGVDVRMG PVSTGLGEIY WWSVEYEKPG ASAPVRDGAP GWQTDGSYIT PEGERLTDDF
QRTVYLRTVQ DWIVRPQMKT VPGVAGADAI GGFVKQFQVQ PDPAKLIGYG LSFKQVVDAI
EANNASRGAN YIEQNGEGYV VRAAGRVENL EDIEQVVVTT RGGVPVRVRD LAEVSIGKEL
RTGSASINGR EVVLGTALML IGGNSRTVAA AADAKIKPIS KTLPPGIFAR TVLNRTELVD
ATIYTVSKNL AEGALLVIAV LFLLLGNFRA ALVTACVIPI TMLMTATGML QGRLSANLMS
LGALDFGLIV DGAVIIAENS LRHLAERQRE VGRVLSLQER LETVKTSTSE MIRPSVYGQI
IIILVYTPLL AFTGVEGKTF EPMALTVMIA LAFAFIVSLT FVPAAVAITI SGAVKEGENV
IVRSLKRLYA PVLSGAVARP LPVIAAAALL FAGAALLFMR LGQEFTPTLD EKNIVMEVKR
VPSTALAQSQ AMQLLIERQI SKLPEVAFVF SRTGTPDLAA DPMPPSASDT YIIVKAQDEW
PDPSATKEDL IKKIEAEAVK LPGNKVGFSQ PIEMRFNELI AGVREDLAVK VFGDDFSEMQ
RTAAQISDVI RKIDGAESVK VEETSGLPFL DIKIDKAEIA RRGLSLGAVQ DLVQTAIGGT
DAGLVFEGDR RFRIVVRLSD AARNDIPTLE ELPVPLPRVN SDAPTASVPL RTIATFEQTT
GYNQISRENG KRRVVTTAEV RGRDIGSLVA EAQAKVGDQV RLPPGSYLAW GGQFENFAVA
RQRLAFVVPA VFVLIYLLLF GALGSARDAL LVFSAVPLAL TGGIAALWLR GMPFSISAAV
GFIALSGVAV LNGLVMLTQI RKLIADGAQE RAGIIEGALT RFRPVAMTAL VASFGFVPMA
LATGTGAEVQ KPLATVVIGG LLSATLLTLV VLPALYARFA VPRHRQRSDQ ARPALIHDRA
AE
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