Gene BBta_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3406 
Symbol 
ID5152972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand+ 
Start bp3554379 
End bp3554984 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content65% 
IMG OID640558263 
ProductTetR family transcriptional regulator 
Protein accessionYP_001239410 
Protein GI148254825 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.507531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCTATC GACCGGAACA CAAGGCGGAA ACACGCGCAC GTATCGTCGA GAATGCGCGC 
CTGCTCTTCA ACCGGCATGG TTATGACAAC GTGACCATCG ACATGGTGAT GGAGGCTGCG 
TCGCTCACGC GTGGCGGATT CTACGGTCAT TTCCGAAACA AGCAGGAGCT GTTCGCAGCG 
GCGGTGGCCA GCTTCCTGAT GGGCCGCGGC GCGCGCTGGC GCGCCGAGGC CGGCGTCAAT 
CCTGCCGACC CGGCGCTGGA GGATGCTGCA AACATGCTCC GCAGCTATCT TTCGCCCGCG 
CATCTCGATG ATCTCGAAGG CCAATGCCCG ATGATCGCCC TGCCGTCGGA TGTCGCAAGA 
GCGGAGCCGC AGGTTCAGAC GGCCTATCAG CACCTGCTGC AGGCCATGAT CGGACTTTAC 
GAGCGGTCCA TGCCCGAGAC CCGTGAAGAC CGCCGTACGA CCGCCCTGGC ACTTGCGGCG 
CTGAGCGTCG GCGGGATGGT TCTCGCCCGG ACGATTCCCG ACGCGGCGCT TGCCGCCGAG 
GTCCGCGACG CCGCGTTCAG GAAGGCGCTC GGGATGCTGT CGCTGAATGC GAAGATGGCC 
GGCTGA
 
Protein sequence
MPYRPEHKAE TRARIVENAR LLFNRHGYDN VTIDMVMEAA SLTRGGFYGH FRNKQELFAA 
AVASFLMGRG ARWRAEAGVN PADPALEDAA NMLRSYLSPA HLDDLEGQCP MIALPSDVAR 
AEPQVQTAYQ HLLQAMIGLY ERSMPETRED RRTTALALAA LSVGGMVLAR TIPDAALAAE 
VRDAAFRKAL GMLSLNAKMA G