Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3398 |
Symbol | |
ID | 5155985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3549027 |
End bp | 3549938 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640558256 |
Product | hypothetical protein |
Protein accession | YP_001239403 |
Protein GI | 148254818 |
COG category | [S] Function unknown |
COG ID | [COG3220] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0783117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATCT CACCTCAACG GATTGATCCG GCCCTGGGCC GCGATCCGCG GACTTCGCGG CATGGGCAGA AGCCAGACTT TCTCGGCTTC GGCCTCGGCC TTCGCGCCCA GCATTACGCT GACATCCTCG ATGGCGATCC GCCGGTCGAC TGGTTCGAGA TCATTAGCGA GAACTACATG ATCCCGGGCG GTCAGCCGCT GCGTATCCTC GACCGCATCA GGGAGCGCTT CCCCGTCGTC ATGCATGGCG TGTCGCTCTC GATCGCCTCC ACCTCTCCGC CCGACTTCGG CTATCTCCAG ATGCTGAAGG ATCTCGCCCA GAGGGTCGAG CCGCGCTGGG TTTCGGATCA CCTGTGCTGG ACCGGTGTTC ACGGGCAAAA CCTGCACGAC CTGCTGCCGA TCCCCTACAC CCATGAGGCG CTCGATTATG TCGTCAACCG GGTGCAACTG GTCCAGGACT ATCTCGGACG GGCGCTGGTG CTGGAGAACG CCTCGACCTA TGTCCAGTTC AGGCATCAGG ACATGACCGA ATGGGAATTC CTGACCGAGC TCACGCGGCG CTCAGGCTGC TTCCTGCTGC TCGACATCAA CAACGTCTAT GTCAGCGCCT TCAACCATGG CTTCGATCCC CATGAGTTTC TCGAAGGCAT TCCCACCGAT CGGGTGGTCC AGTTCCACAT GGCCGGACAC AGTCACATGG GAACGCATAT CATCGATACC CATGACCATC TCGTCTGCGA TGACGTCTTT GACCTCTATC GCGCTGCGCT GAAGCGCTTC GGGGCGGTCT CGACCATGGT CGAGCGCGAC GACAACATTC CGCCGCTCGA TGAACTGCTC GCCGAGGTGC AGCGGACACG CGAGATTGCG GCGGAGATCC TCTCGGCCGA CGACCGGGAC CGCGCATCAT GA
|
Protein sequence | MTISPQRIDP ALGRDPRTSR HGQKPDFLGF GLGLRAQHYA DILDGDPPVD WFEIISENYM IPGGQPLRIL DRIRERFPVV MHGVSLSIAS TSPPDFGYLQ MLKDLAQRVE PRWVSDHLCW TGVHGQNLHD LLPIPYTHEA LDYVVNRVQL VQDYLGRALV LENASTYVQF RHQDMTEWEF LTELTRRSGC FLLLDINNVY VSAFNHGFDP HEFLEGIPTD RVVQFHMAGH SHMGTHIIDT HDHLVCDDVF DLYRAALKRF GAVSTMVERD DNIPPLDELL AEVQRTREIA AEILSADDRD RAS
|
| |