Gene BBta_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3398 
Symbol 
ID5155985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3549027 
End bp3549938 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content61% 
IMG OID640558256 
Producthypothetical protein 
Protein accessionYP_001239403 
Protein GI148254818 
COG category[S] Function unknown 
COG ID[COG3220] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0783117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCT CACCTCAACG GATTGATCCG GCCCTGGGCC GCGATCCGCG GACTTCGCGG 
CATGGGCAGA AGCCAGACTT TCTCGGCTTC GGCCTCGGCC TTCGCGCCCA GCATTACGCT
GACATCCTCG ATGGCGATCC GCCGGTCGAC TGGTTCGAGA TCATTAGCGA GAACTACATG
ATCCCGGGCG GTCAGCCGCT GCGTATCCTC GACCGCATCA GGGAGCGCTT CCCCGTCGTC
ATGCATGGCG TGTCGCTCTC GATCGCCTCC ACCTCTCCGC CCGACTTCGG CTATCTCCAG
ATGCTGAAGG ATCTCGCCCA GAGGGTCGAG CCGCGCTGGG TTTCGGATCA CCTGTGCTGG
ACCGGTGTTC ACGGGCAAAA CCTGCACGAC CTGCTGCCGA TCCCCTACAC CCATGAGGCG
CTCGATTATG TCGTCAACCG GGTGCAACTG GTCCAGGACT ATCTCGGACG GGCGCTGGTG
CTGGAGAACG CCTCGACCTA TGTCCAGTTC AGGCATCAGG ACATGACCGA ATGGGAATTC
CTGACCGAGC TCACGCGGCG CTCAGGCTGC TTCCTGCTGC TCGACATCAA CAACGTCTAT
GTCAGCGCCT TCAACCATGG CTTCGATCCC CATGAGTTTC TCGAAGGCAT TCCCACCGAT
CGGGTGGTCC AGTTCCACAT GGCCGGACAC AGTCACATGG GAACGCATAT CATCGATACC
CATGACCATC TCGTCTGCGA TGACGTCTTT GACCTCTATC GCGCTGCGCT GAAGCGCTTC
GGGGCGGTCT CGACCATGGT CGAGCGCGAC GACAACATTC CGCCGCTCGA TGAACTGCTC
GCCGAGGTGC AGCGGACACG CGAGATTGCG GCGGAGATCC TCTCGGCCGA CGACCGGGAC
CGCGCATCAT GA
 
Protein sequence
MTISPQRIDP ALGRDPRTSR HGQKPDFLGF GLGLRAQHYA DILDGDPPVD WFEIISENYM 
IPGGQPLRIL DRIRERFPVV MHGVSLSIAS TSPPDFGYLQ MLKDLAQRVE PRWVSDHLCW
TGVHGQNLHD LLPIPYTHEA LDYVVNRVQL VQDYLGRALV LENASTYVQF RHQDMTEWEF
LTELTRRSGC FLLLDINNVY VSAFNHGFDP HEFLEGIPTD RVVQFHMAGH SHMGTHIIDT
HDHLVCDDVF DLYRAALKRF GAVSTMVERD DNIPPLDELL AEVQRTREIA AEILSADDRD
RAS