| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3387 |
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| Symbol | |
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| ID | 5154883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3541384 |
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| End bp | 3541962 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640558245 |
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| Product | putative RNA polymerase ECF-type sigma factor |
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| Protein accession | YP_001239392 |
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| Protein GI | 148254807 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.187925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATGTCTG GCGCGGACCG GGGCAGATCG GATCTGGGGC ACCTGATGCA GCTCGCCCAG
GCCGGCGACG ACATCGCCTA TTTCCGCCTG CTGAAGGACA TCACTCCGAT CATTCGCGCA
GCCGTACGGC GAAGATTACC AAGGTCTCAG CCTGCCGACC TCGAGGACGT CGTGCAGGAT
GTGCTGGTGT CAGTGCATGC CGTTCGAGCC ACCTACGATC CGGCGCGTCC GTTCCTGCCG
TGGCTGCTGA CGATCACCCA TAACCGGGCC ATCGATCGCT TCCGGAAGAT GAGTCGTATC
GGGGTGAATG AAACGAATGT CGGCGAGATG CTTGAAACCT TTCCGCAGCA GCCGACGAAC
CTGTCTGCGG AAGGTTATGG CGATGAAGAA TTCCTGCAGC GGGAAATAGC TGCTCTGCCG
GCCTCCCAGA GACGCGCCAT CGAGCTGCTG AAGATCAAGG AGCTTTCCTT GAAGGAAGCC
GCAGCCGAAA GCGGGATTAC GATCGCGAAC CTGAAGGTAC TGGTGCATCG CGCGATGAAG
ACCCTACGCA GCAGGATTGC CAACGACCAT GACGACTGA
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| Protein sequence | MMSGADRGRS DLGHLMQLAQ AGDDIAYFRL LKDITPIIRA AVRRRLPRSQ PADLEDVVQD
VLVSVHAVRA TYDPARPFLP WLLTITHNRA IDRFRKMSRI GVNETNVGEM LETFPQQPTN
LSAEGYGDEE FLQREIAALP ASQRRAIELL KIKELSLKEA AAESGITIAN LKVLVHRAMK
TLRSRIANDH DD
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