Gene BBta_3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3378 
Symbol 
ID5155034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3532342 
End bp3534129 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content63% 
IMG OID640558236 
Producthypothetical protein 
Protein accessionYP_001239383 
Protein GI148254798 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCTC CACTCCTGCT GTTTGGCGGC CCGTACTCGA ACCTGCAGGC GACCGAAGCC 
GTGCTGGCGG AAGCTCGGCG GAGACATATT CCACCTCACC GCATCGTCTG CACGGGAGAC
GTCGTCGCCT ATGGCGGCGA TCCGAAGGCC TGTGTCGACC TGATCCGCCG ATCCGGCATC
CAAATCGTCA TGGGAAACTG CGAGGAGCAA TTGGCGGCCG ATGCCGAGGA TTGCGGCTGC
GGCTTTGCCC CGGGCAGCGA GTGCGACCGC CTGTCAGCTG CCTGGTTTAC CTTCGCCCGG
TCCGAGCTCG ACGCCGACGA CCGCGCATGG ATGGCAACGC TGCCGCGCAG CCTGTCGGTC
GAGATTGCCG GGCTTCGGTT GGTCGCGGTG CATGGCAGTC TCGGCGAAAT CAGCCGGTTC
GTATTCGCCT CCACGCCGAC GCGGATCAAG GCCTTGGACG TCACCCTTGC GGGCGCCGAC
GGCATCATCG GTGGCCATTG CGGACTTCCG TTTACCCAGA GCATCGGCGA CGGGCTTTGG
CACAATCCTG GGGTGGTCGG CATGCCAGCC AATGATGGCA CCCCCCGAGT CTGGTACAGC
GTCATCGAGC CCGGTTCCGA GCCGCGCTCG ATCGCAATCG AGCACAACGC CCTCGAGTAC
GATCACGAAG CCGCCGCTAG CGCGATGCGC CGGGCGGGCC TTCCGGAAGG CTACACGAAC
GCCCTGTCAT CGGGGCTCTG GCCGAATTGC AACGTCCTGC CTGCGCGTGA GGCAAGGCTT
CAAGGAAGCG CCCTTTCGCC GGGAACGCTC AGCTGGGCCA AGACTGCCCC CTGCGCTACT
TGGCCAGAGG CTCTTCAGCC GCTCGGGATC GCCGCCGACA AATTCAAGAA TCCGCACTTG
ACGGCAAAGG GCGAACGGCG CGCAACCGTG GGGCTCGCAG CGCTCGAGAC GCTTTGGATC
AACACCGGAA CGTTGTGCAA TCTGTCCTGC AGCAGCTGCT ACATCGAATC GACGCCGCGC
AACGACCGCC TCTCCTACAT TACGGCAAGC GAGGTCCGGT CTTTTCTCGA CGAGATCGAA
AGCGATGGCC TGCCGACACG GCTGGTCGGC TTCACCGGCG GCGAGCCGTT CATGAATCCG
GAATTACCGG AGATGCTCGC CGACGTGCTC GCAAGGGGCT TTGAAGCTCT GGTGCTGACC
AATGCGATGA AGCCGATGAG GCGGTACGAG CGAGCTCTCC TCGATCTCAA GAAAAAGTTC
GGCAAGCGCT TGACGTTGAG AGTCTCGCTG GATCACTACA CGCGCAGCCT GCACGAGCTC
GAACGCGGTC CCCATACCTG GCAACCAACC CTGGACGGCC TGGATTGGCT GTTCAAAAAT
GGCTTCAAGA CGCACGTGGC TGGAAGACGT TATTCCGGCG AAGCCGAGGG CATCGTACGT
GCTGGTTATG CTCGCCAGCT CGCGGCCTAC GATATTGACC CTCAAGAGCC GGGTGAGCTC
GTTATCTTTC CCGAGATGGA CGCAACGGTC GACGTGCCCG AGATCACCGA GTCCTGTTGG
GGCGTCCTCG GCAAATCACC TGCAGAGGTG ATGTGCGCCT CCTCACGCAT GATCGTAAAG
CGACGCGAGG CGTCGCATCC AGCCGTCGTG GCCTGCACGC TGCTGCCCTA TGATCCGAGC
TTCGAGCTTG GCACCTCGCT CGCTGATGCC TCTGGCCCGG TAAGTCTCAA TCATCCCCAC
TGTGCAAAGT TCTGCGTACT GGGCGGCGCA AGCTGCAGCG TAAAGTAG
 
Protein sequence
MDAPLLLFGG PYSNLQATEA VLAEARRRHI PPHRIVCTGD VVAYGGDPKA CVDLIRRSGI 
QIVMGNCEEQ LAADAEDCGC GFAPGSECDR LSAAWFTFAR SELDADDRAW MATLPRSLSV
EIAGLRLVAV HGSLGEISRF VFASTPTRIK ALDVTLAGAD GIIGGHCGLP FTQSIGDGLW
HNPGVVGMPA NDGTPRVWYS VIEPGSEPRS IAIEHNALEY DHEAAASAMR RAGLPEGYTN
ALSSGLWPNC NVLPAREARL QGSALSPGTL SWAKTAPCAT WPEALQPLGI AADKFKNPHL
TAKGERRATV GLAALETLWI NTGTLCNLSC SSCYIESTPR NDRLSYITAS EVRSFLDEIE
SDGLPTRLVG FTGGEPFMNP ELPEMLADVL ARGFEALVLT NAMKPMRRYE RALLDLKKKF
GKRLTLRVSL DHYTRSLHEL ERGPHTWQPT LDGLDWLFKN GFKTHVAGRR YSGEAEGIVR
AGYARQLAAY DIDPQEPGEL VIFPEMDATV DVPEITESCW GVLGKSPAEV MCASSRMIVK
RREASHPAVV ACTLLPYDPS FELGTSLADA SGPVSLNHPH CAKFCVLGGA SCSVK