Gene BBta_3368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3368 
Symbol 
ID5155060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3525487 
End bp3526224 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content65% 
IMG OID640558226 
Productconjugal transfer protein TrbJ 
Protein accessionYP_001239373 
Protein GI148254788 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5314] Conjugal transfer/entry exclusion protein 
TIGRFAM ID[TIGR02780] P-type conjugative transfer protein TrbJ 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.262472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATC CTCGTGGTCT CGCCCGTGGC GCTGCGGCAG CCGTCGTCAT CTGGGCGGCG 
TCGACCTGCA TGTCGTCGGC GCAGCTGGTC GTGTTCGATC CGAACAATTA CGCCCAGAAC
GTCCTGACCG CCGTGCGCGA GCTGCAGCAG ATCAACAATC AAATCATCTC GCTGCAGAAC
CAGGCGCAGA TGCTGATCAA CCAGGCGAAG AATCTTGCGA GTCTGCCGTA TTCGTCGCTG
GCGCAGTTGC AGCAGTCGAT CCAGCGCACT CAGCAGCTGC TCAAGGAGGC CCAGCGCCTC
GCCTATGATG TGCAGCAGAT CGACAAGGCG TTCGCGACCA CCTATGCGCC GGCGAGCAGC
AGCCAATCGA GTCAGGCGCT GGTGGAGAGT GCGCAGGCGC GCTGGCAGAC TTCGGTGGCG
GCGCTGCAGG ATGCGCTCAA GGTCCAAGCG GGCGTCGTCG GCAATCTCAA CACGGTCAAG
ACCCAGTCCT CCGCGCTCAT TGCGGCGAGC CAAGGCGCGA GCGGGGCTTT GCAGGTCACC
CAGGCCGGCA ACCAGATCCT TGCGCTGCAG GCTCAGCAAT TGGCCGATCT CACCGCGAGC
GTGGCCGCGC AGGGCCGGGC CGCGATGCTG GATGCTGCCC AGCGCGCCGC CGCTCAGGAT
CAGGGTCGCG AGCAGCTCAA GCGCTTCCTG ACGCCAGGTC AAGGCTACCA GCCCTCCAAC
GTACGGATGT TCCATTGA
 
Protein sequence
MTDPRGLARG AAAAVVIWAA STCMSSAQLV VFDPNNYAQN VLTAVRELQQ INNQIISLQN 
QAQMLINQAK NLASLPYSSL AQLQQSIQRT QQLLKEAQRL AYDVQQIDKA FATTYAPASS
SQSSQALVES AQARWQTSVA ALQDALKVQA GVVGNLNTVK TQSSALIAAS QGASGALQVT
QAGNQILALQ AQQLADLTAS VAAQGRAAML DAAQRAAAQD QGREQLKRFL TPGQGYQPSN
VRMFH