| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3366 |
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| Symbol | trbD |
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| ID | 5154836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3522754 |
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| End bp | 3523035 |
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| Gene Length | 282 bp |
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| Protein Length | 93 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640558224 |
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| Product | conjugal transfer protein trbD |
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| Protein accession | YP_001239371 |
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| Protein GI | 148254786 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5268] Type IV secretory pathway, TrbD component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.82281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGCGT TTGGCCAAGC CGATCAGTCG CTTCCCGGCT TCGCGATCAC TGTCCGCCGC
TCTCTGACCG AGCCCATCCT GCTCGGCGGT GCGCCACGCG CCATCGCGAT CCTCAACGGT
ACGCTCGCCG CGGCGCTTGG CTTGGGGCTG CGGCTCTGGA TTGCGGGGCT TCTGTTCTGG
GTGATCGGCC ATGGCGCGGC AGTGTGGGCC GCCAAACGCG ATCCGGACTT CGTCGAGGTC
GTGCGCCGGC ACCTGCGCAT TCCCGGTCAT CTCAATGTGT GA
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| Protein sequence | MDAFGQADQS LPGFAITVRR SLTEPILLGG APRAIAILNG TLAAALGLGL RLWIAGLLFW
VIGHGAAVWA AKRDPDFVEV VRRHLRIPGH LNV
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