| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3364 |
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| Symbol | trbB |
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| ID | 5154834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3521448 |
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| End bp | 3522428 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640558222 |
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| Product | conjugal transfer protein trbB |
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| Protein accession | YP_001239369 |
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| Protein GI | 148254784 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.538744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTTC ATTCATGGCG GACCGAGGCG AGCTCGCGCG GCGCGCGGAT GTTGCGCACG
GCGCTGGGGC CTGCCATCGC GGGCTGGCTC GATGATCCCG CTGTCATCGA GGTGATGCTC
AACCCGGATG GCCGGCTCTG GGTCGATCGT CTCGCTTCGG GTCTGACTGC AACGGGTGAG
ACGCTCTCGC CCGCCGATGG CGAGCGCATC GTGCGTCTGG TCGCGCATCA TGTCGGCGGC
GAGGTTCATG CCGGTGCGCC GCGCGTCTCG GCCGAGCTGC CGGAGACCGG TGAGCGCTTC
GAAGGTCTGC TGCCGCCCGT CGTGATCGCG CCGGCCTTTG CCATCCGCAA GCCCGCGGTC
GCCGTGTTCA CGCTCGCGGA TTACGTCGCG TCCGGGATCG TTACGCGAGA GCAGGCCGAC
CTGTTGCGAA TAGCTATGGC CGCGCGCAGC AACATCCTCG TCGCAGGGGG CACCTCGACC
GGCAAGACCA CGCTGACGAA TGCGCTGTTG GCGGAAGTTG CAAGAACGGC CGATCGGGTG
GTGCTGATCG AGGATACGCG CGAGCTGCAA TGCGCAGCGC CCAATCTGGT GTCGCTTCGG
ACCAGGGACG GTGTTGCCAC CCTGACGGAC CTCGTGCGGT CCGCGTTGCG GTTGCGACCC
GATAGGATCC CGATCGGCGA AGTTCGCGGG CCCGAGGCTC TGGATCTGCT GAAGGCTTGG
GGCACCGGTC ATCCCGGCGG CATCGGCACC ATCCATGCGG GCTCCGCGAT CGGCGCGCTC
AGGCGCCTGG AGCAATTGAT CCAGGAAGCC GTGGTCACCG TGCCGCGTGC TCTGATCGCC
GAGACCATCC AGCTGATCGC CGTGCTCGCC GGCCGCGGCG CAGACCGGCG CCTCGTCGAG
CTCGCCCACG TCGATGGGCT GAATGCCCGC GGCGACTATC AGCTTAGCCA GCTCTCGCTC
TCGCAAGGAG AACAGCCATG A
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| Protein sequence | MAVHSWRTEA SSRGARMLRT ALGPAIAGWL DDPAVIEVML NPDGRLWVDR LASGLTATGE
TLSPADGERI VRLVAHHVGG EVHAGAPRVS AELPETGERF EGLLPPVVIA PAFAIRKPAV
AVFTLADYVA SGIVTREQAD LLRIAMAARS NILVAGGTST GKTTLTNALL AEVARTADRV
VLIEDTRELQ CAAPNLVSLR TRDGVATLTD LVRSALRLRP DRIPIGEVRG PEALDLLKAW
GTGHPGGIGT IHAGSAIGAL RRLEQLIQEA VVTVPRALIA ETIQLIAVLA GRGADRRLVE
LAHVDGLNAR GDYQLSQLSL SQGEQP
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