| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3351 |
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| Symbol | |
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| ID | 5153938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3506148 |
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| End bp | 3507899 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640558211 |
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| Product | hypothetical protein |
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| Protein accession | YP_001239358 |
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| Protein GI | 148254773 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.182876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.872957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGG ACGAGAGCGA CTTCCGCGTT CGTCCCGGTC GGATCAGGAA CGGTGGCCGT
GGCCCGGCCA AGCCGAAGAG CTTTGTTGGC CAGGTCATGC GGGCTGCGAG GAAGGCTGGT
CACACGGGCA AAGGCTTTGG CCGGGAGGGA CGAAGGGCCG GGGCGCGGTT CGGGCGCGGG
CGGTCTGCTG CGCTGGCATT GTCGCTGCGC TCGCCGACGC GCCGGGTCGT GATCAAGGCG
CGCGTGGTCC GGCATCGCGG GACAAAGTTC CGGTCTGCGC CGCTTGCCAA GCATGTGAGT
TATCTCAAGC GTGAGGGCGT CACGCGCGAC GGCGCGGATG CCACGATGTT CGATGCGCGA
TCGGACCAGG CCGATGTGCG GGCGTTCGCT GCCAGCGTCG AGAGCGACCG CCATCATTTC
CGCTTCATTG TCTCGCCGGA GGATGCCGCT GAGATGCAGG ATCTGCGTGC CTTCACCCGC
GAGCTGATGC GCGATGCCGA GCGCGATCTC GGGACGCGGC TGGAGTGGAT CGCGGTCGAC
CATTGGAACA CGGACAATCC GCACGTCCAT GTTCTCGTGC GCGGCCGCAG CGATGACGGC
CAGGATCTCG TCATCAGCCG CGACTATATC AGCCGTGGAT TTCGCGAGCG GGCAGCGGAG
CGTGTCGGTC TTGAGCTCGG CCCGCGCAGC GAGCACGAGA TCAAGTCGGC TCTGGAACGC
GAGGTCGATG CCGAGCACTG GACCGGGCTC GATCGTGCGC TTCGCGCTGT GGCCGATGAG
GGAGCTGGCG TCGCGGATCT TCGCCTGGTG ACGGGCCGCG AAGATCCGGA GCTGCGAAGG
CTGATGACGG GCAGGGCGGC CCGGCTGGAA CGTCTTGGTC TGGCCGAGCA GATCGCGCCG
GGGCGTTGGA CACTGAAAGC TGGTCTGGAG GACGGCTTGC GTGATCTCGC GATCCGCGGC
GATATCATCA AAACCATGCA CCGGGCTATC GCCGGCTTCG GCCGGGAGCC TGATGTCACG
GGCTTTGCGC TGCATGGTGA CCAGCCGGCC GATCCGGTGC TCGGGCGCCT CGTGGCGCGT
GGCCTCCATG ACGAGCTCAA CGGCTCGGCC TATGCCATCG TAGAAGGCAT CGATGGTCGA
ACCCATCATC TCAAATTCGC TGATCTCGAG CTGACCGGCG ATGCTCAGCT GGGAGCAATC
GTCGAGGCGC GCGTGTATGA CGATGCGCAG GGTCGCAAGC GGCTGTCGCT GGCGACACGA
TCGGATCTCG CCCTCGACGC TCAGGTGAGC GCGGATGGTG CGACATGGCT CGACCGGCAA
TTGCTGGCGC GCGAGCCTGT TGCTGCTGCC GGCGGCTTCG GGGCGGACGT CCGGGCCGCC
ATGGAACGCC GGATCGATCA TCTGGCCGCT GAGGGTCTCG CTCGTCGGCA AGGGCAGCAG
GTCGTGTTCG CGCGCGATCT GCTCACCACC CTGCGCCAGC GCGAGCTGAA TGCCGCCGCA
TCCAGGATTT CGGCCGAGAC GGCGCTGGCC TACCGGCCGA TCGGCGAAGG CGATCCGATC
GCGGGCATCT ACCGTCAGCG CGTGACCTTG GCGTCCGGTC GCTTCGCCAT GATCGACGAC
GGGCTCGGCT TTCAGCTCGT GCCTTGGCGT CCGGCACTTG AACAGCAACT CGGGCGCGAG
GTGCGCGGGA TCGCCATCAG CGGCGGCGGC GTGAACTGGA GTTTTGGACG CAAGCTAGGC
ATCGGCCTCT GA
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| Protein sequence | MSRDESDFRV RPGRIRNGGR GPAKPKSFVG QVMRAARKAG HTGKGFGREG RRAGARFGRG
RSAALALSLR SPTRRVVIKA RVVRHRGTKF RSAPLAKHVS YLKREGVTRD GADATMFDAR
SDQADVRAFA ASVESDRHHF RFIVSPEDAA EMQDLRAFTR ELMRDAERDL GTRLEWIAVD
HWNTDNPHVH VLVRGRSDDG QDLVISRDYI SRGFRERAAE RVGLELGPRS EHEIKSALER
EVDAEHWTGL DRALRAVADE GAGVADLRLV TGREDPELRR LMTGRAARLE RLGLAEQIAP
GRWTLKAGLE DGLRDLAIRG DIIKTMHRAI AGFGREPDVT GFALHGDQPA DPVLGRLVAR
GLHDELNGSA YAIVEGIDGR THHLKFADLE LTGDAQLGAI VEARVYDDAQ GRKRLSLATR
SDLALDAQVS ADGATWLDRQ LLAREPVAAA GGFGADVRAA MERRIDHLAA EGLARRQGQQ
VVFARDLLTT LRQRELNAAA SRISAETALA YRPIGEGDPI AGIYRQRVTL ASGRFAMIDD
GLGFQLVPWR PALEQQLGRE VRGIAISGGG VNWSFGRKLG IGL
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