Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3350 |
Symbol | |
ID | 5153937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3505071 |
End bp | 3505901 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640558210 |
Product | putative lytic transglycosylase |
Protein accession | YP_001239357 |
Protein GI | 148254772 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.124334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.958591 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGACG GTCGCCGGCC CTTCGGTGCT CGTTCGATCG CTCAGACCTC CGCTGGCTCG TTCGTCGCGG CCGCTTCTCG CGTCGTCGCT ACGCAAGTCC GGAGGCACGG GCAGAGCGTT ATCATCGCTG CAGTCCTCGC ATGGTCGATT GTCGCCGGCG CGACAGCACA GGCCTCCCCG TCGTCCTCCC GTCTGCACGT CGTGAGCACG TCCTCTGTTG ACACATTTGC AGGTTCTGTG AGCGAAGCTG CGCATCGGTT CGATATTCCC GAGCGCTGGA TCTATGCCGT CATGCGCGCT GAAAGCGGCG GTGATCGGCG GGCTCGCTCG TCAAAGGGCG CCGTCGGCCT GATGCAGATC ATGCCGGAGA CCTGGCGCGA TTTGCGCGCC CGCTACGGCC TTGGGGCTGA TCCCTTCGAT CCTCACGACA ACGTTCTGGC GGGCGCAGCC TATCTTCGCG AGCTGCACGA CCGTTATGGA TCGCCTGGGT TCCTCGCAGC CTACAATGCG GGTCCCGGGC GGTATGAACG TCATCTGGCA ACGGGCCGGC CGCTGCCGGA CGAAACCCGA GCCTACGTCG CGAAGCTTTC GTCCGCCGTC GGCGGTGTGC AAGCCCAACG GCCTGTCGAT GTCTCCCGAG CGGCAGCGTT CTCGCTTGCG GATTTGTTCG CCCCGCGCGG TTCGCAACGC ATGGCCGACG ATCATCCGAG TGTAACTGGC AAGCGCTCGG TCAGATCATT GCGTGTCGCT CGCCGCGGCA ATCTTTCGTC GCTTCTACCG CGGCCGCATG CGTTGTTTGC TCGGCATGCC GGCGGAAATC TCTGGCGATG A
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Protein sequence | MHDGRRPFGA RSIAQTSAGS FVAAASRVVA TQVRRHGQSV IIAAVLAWSI VAGATAQASP SSSRLHVVST SSVDTFAGSV SEAAHRFDIP ERWIYAVMRA ESGGDRRARS SKGAVGLMQI MPETWRDLRA RYGLGADPFD PHDNVLAGAA YLRELHDRYG SPGFLAAYNA GPGRYERHLA TGRPLPDETR AYVAKLSSAV GGVQAQRPVD VSRAAAFSLA DLFAPRGSQR MADDHPSVTG KRSVRSLRVA RRGNLSSLLP RPHALFARHA GGNLWR
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