Gene BBta_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3333 
Symbol 
ID5154446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3488476 
End bp3490209 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content67% 
IMG OID640558193 
Productputative plasmid stabilization protein 
Protein accessionYP_001239340 
Protein GI148254755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGTGACA GCGGCATGGG CGAGGAGGAG ATCGCGGCGA GGCATTTCGT GACGGTTGCG 
ATCGTCAAGC AGCGCTTGCG GCTGGCTGCC GTCTCGCCTG CGCTGCTCGA TGTCTACGCC
GCCGACGGCA TGACGCTCGA GCAGTTGATG GCGTTTACGG TGACGGCGGA TCATGCGCGC
CAACAGGAGG TTTTGGACAA GGTCAGCCGC TCCGGGTGCG ATGCGCCCTA CCAGATCCGC
CGTCAGCTTA CGGAGCAGAC GGTGCGAGCG TCCGACCGCA GGGCGCAGTT CGTCGGACTT
TCCGCCTACG AGGCAGCGGG CGGGGTCGTG CTGCGGGATC TGTTCGAGGC CGATGACGGT
GGATGGCTGC AGGATGTCGC GCTGCTCGAC CGGCTCGTGG CGGAAAAGCT GCAGACCGAA
GCGGAGCGGA TCGGCGCCGA GGGCTGGAAG TGGATCGCAG CCGCCGTCGA TTTCCCGTTC
GGACATACGC ATAGCCTGCG CGAGTGTAAC GGAGAGCCGG CCGAACTCAC CGCCGATGAG
CAGGCGGCCA TCGAAGCGCT GCGGACCGAG CAGGCCAAAC TCGAGGCTGA CTATGGCCAG
GCCGACGAGT TGCCTGAGAA CGTCGATCGG CGTCTCGGTG AGATCGAGGC TGCGCTGCAG
TCGTTCGATG ATCGGCCGAT GATCTACGAT GCAGCCGAGA TGGCGCGGGC CGGCGCGTTC
GTCAGCATCG ACTCCGAGGG TGGCCTCCGC GTCGCCCGTG GCTTCGTCCG TCCAGAGGAT
GAGGTCACGG CGACCAGCGA CGAGCCGAAT GCCGAAGCTG GTGCCGACGG CGATCACGGG
ACCGGCGTTC CTAACGTGGC GGGCAGGGGA CCGGCGCCGA CGATCGTCAT CGGCAACGGC
GAGCAGGATG GGTCTAATGA GGACGGGGAG GATGTCGAGC GCCCATTGCC CGACCGGTTG
ATCAGCGAGC TCTCAGCCTA TCGCACGCTC GCCCTTCGCG ATGCGCTCGG CCGAGAGCCC
TCGATCGCGT TCCAGGCGGT GTTGCACAGC TTCGTGCTGG CGACATTCTA TCCGTTCGGT
TCGACGCTCA ATTGCCTGGA TATCTCGCTG CGTACGCCGA GCTTCCCGGC GCAGCCGCCC
GGCTTGCAGG ACAGCGCCCC GGCCAAGGCG ATTGGCGCCC GGCACACATC CTGGAAGGCG
AAACTGCCGG CCAGCGACAA GGACCTCTGG GCAGCGTTGA CGGCGATGGA CGCGACAGCC
CAGGCCGAGC TCTTCGCCCA TTGCGCCTCG CAGGCCGTGA ACGCGCTCTT TGAGCCGGCC
AACCGGGTGC ATCAAGGCCG CCTGTCGGCC CATGGCGTCC GCGGCCGCCT CGATCAGGCT
GACCGTCTGT CGCGTGCCGT TGGGCTCGAT CTGGTCAGCG CCGGCTGGAG GCCCACCGTG
GACAATTACC TCGGTCGCGT CACCAAGCAC CGCATCCTGC AGGCGGTGCG CGAAGCGAAG
GGCGAAGCTT CGGTCCAGCT GATCGCGCAT TTGAAGAAGC CGGACATGGC GCGCGAAGCC
GAACGGCTGC TCGACAGCAG CCGCTGGCTG CCGGAGCCGC TGCGTGGCGC CGATGCGGAC
ATGAGGCCGG CGGTCGAAGG CGCCGATGCC GACAGCCTGC CGGCGTTCCT CAGCGAGGAC
GAGGAGGCGA GCGAAGGCGC AGACGAAGTC GAGGAGATCG TTGCCGCGGA ATGA
 
Protein sequence
MRDSGMGEEE IAARHFVTVA IVKQRLRLAA VSPALLDVYA ADGMTLEQLM AFTVTADHAR 
QQEVLDKVSR SGCDAPYQIR RQLTEQTVRA SDRRAQFVGL SAYEAAGGVV LRDLFEADDG
GWLQDVALLD RLVAEKLQTE AERIGAEGWK WIAAAVDFPF GHTHSLRECN GEPAELTADE
QAAIEALRTE QAKLEADYGQ ADELPENVDR RLGEIEAALQ SFDDRPMIYD AAEMARAGAF
VSIDSEGGLR VARGFVRPED EVTATSDEPN AEAGADGDHG TGVPNVAGRG PAPTIVIGNG
EQDGSNEDGE DVERPLPDRL ISELSAYRTL ALRDALGREP SIAFQAVLHS FVLATFYPFG
STLNCLDISL RTPSFPAQPP GLQDSAPAKA IGARHTSWKA KLPASDKDLW AALTAMDATA
QAELFAHCAS QAVNALFEPA NRVHQGRLSA HGVRGRLDQA DRLSRAVGLD LVSAGWRPTV
DNYLGRVTKH RILQAVREAK GEASVQLIAH LKKPDMAREA ERLLDSSRWL PEPLRGADAD
MRPAVEGADA DSLPAFLSED EEASEGADEV EEIVAAE