Gene BBta_3324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3324 
Symbol 
ID5149364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3478397 
End bp3479329 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content62% 
IMG OID640558184 
Producthypothetical protein 
Protein accessionYP_001239331 
Protein GI148254746 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCCC GCGCCAACTG GAAAGGCTTT CTGCGTCTGT CGCTCGTCAC GTGCCCGGTA 
GCCCTCTACC CGGCCACGTC AGAGTCCGAG AAGATCTCGT TCAACCAGCT GAACAGGCAG
ACCGGCCACC GTATCAGGTA CGTGAAAGTC GACGCTGACA CGGGCGAAGA AGTCCCCAAC
GAGGACATCG TCAAGGGATA TGAGCTCGAG AAGGGCCAAT ACATTGAGGT CTCGAAGGAG
GAGTTCGAGG AGATCGCGCT GGAGTCCACG CGCACGATCG AAATCGACGA GTTCGTGGCC
AGGACAGACA TCGACCCGCG CTATCTGATC CGCCCCTACT ACCTGCGTCC CGATGGCAAG
GTCGGCCACG ATGCCTTCGC CGTGATCCGC GAAACCATCC GGGAGATGAA CAAGGTCGCG
ATCGGCCGGA TCGTTCTCAC CAACCGCGAG CACATCATCG CGCTCGAAGC GATGGACAAG
GGCCTTGTCG GCACGCTGCT GCGCTATCCC TATGAATTGC GATCGGAGCA GGAGTATTTC
GAAGAGATCC AGGACGTGAA GATCACCAAG GACATGCTGG ATCTCGCGCG GCACATCGTG
GAGCAGAGGG CCGGCACCTT CGCACCGGAG AAGTTCGAGG ACCACTATGA GACCGCGCTG
ATCGACCTGA TCAACCAGAA GCGTGCGGGC AAGACGATCC GGCCCAAGGA TCGGCCGAAG
GGCGAGAATG TCGTCGATCT GATGGAGGCG CTGCGGCGGT CGGTCGGGCA GACAGCATCG
CCGACGCAGG CGGCTGCCAA GCCGGCGAAG AAGCCGAAGA AAGCTGCCGC CGGGCAGAAA
GAGATGCTGA TGCCGATTGC GGGAAAGAAG ACCGCCGGTA AGGAGGCGTC GGCGAAGAAG
CAGGCATCCG GCCGGCAGCG GAAGTCGGCT TGA
 
Protein sequence
MAPRANWKGF LRLSLVTCPV ALYPATSESE KISFNQLNRQ TGHRIRYVKV DADTGEEVPN 
EDIVKGYELE KGQYIEVSKE EFEEIALEST RTIEIDEFVA RTDIDPRYLI RPYYLRPDGK
VGHDAFAVIR ETIREMNKVA IGRIVLTNRE HIIALEAMDK GLVGTLLRYP YELRSEQEYF
EEIQDVKITK DMLDLARHIV EQRAGTFAPE KFEDHYETAL IDLINQKRAG KTIRPKDRPK
GENVVDLMEA LRRSVGQTAS PTQAAAKPAK KPKKAAAGQK EMLMPIAGKK TAGKEASAKK
QASGRQRKSA