Gene BBta_3302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3302 
Symbol 
ID5154021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3456752 
End bp3457687 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content68% 
IMG OID640558165 
Productputative aliphatic sulfonates-binding protein precursor (SsuA protein) 
Protein accessionYP_001239312 
Protein GI148254727 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.82561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCCA CGCTCGGCAC AGCGCTGCTG CTCGCCGGAA CGGCATTCGC TGCGGCAGGC 
GACTCGATCG TGCTGCGTGT CGGCGACCAG AAAGGCGGCA ACCGCTCGCT GCTCGAGATT
TCCGGTCTCG CGCGCGACCT CCCCTACAAG ATCGAGTGGG CCGAGTTCCC CGCAGCCGCG
CCCATCCTCG AAGCCATCAA TGCCGGCTCG CTCGACGTCG GCTACACTGG CGACCTGTCG
TTCCTGACGG TCTATGCCGG CGGCGCGCCG ATCAAGGCCA TCGGCGGCAC GCGCTCCGAT
GCGAAGACGC AGGCGATCCT GGTGCGCAAG GATTCGCCGA TCAAATCCGC GGTCGATCTG
AAGGGCAAGA GACTGGCCGG CACGCGCGGC GGCTGGGGAC AGTTCCTGAT CGATGCGACG
CTGGAGAAGG CCGGCTACAA GCTCGACGAG GCCACCTTCG CCCCGCTCGG TCCGGTCGAT
GCGAAGGTCG CGCTACTGGC TGGCTCCGTC GATGCCTGGG CGGTGTGGGA GCCGTACATC
TCCTACGCGA CGCTGAAGGA TGGTGCGCGG GTGGTCTCGC ATGGCGAGGG CCTGACGCCG
ACCATCACCT TCATCGTCGC CTCGGACACC GCCATCGCCA CCAAGCGCGC CGCGCTCCAG
GATTTCGTCA ACCGGCTGAA CCAGGCGCGC CTGTGGTCCC TCGACCATGT CGCCGACTAT
GCGAGAAGCA CGGCCGAGCT GACGAAACTG CCGGAGGACG TCCTGCTGGC GGCCTATCAG
GCGCAGCGCA CCACCCCGAT CGTCATCGAT GACGTCGTCG TGACGGAGGT GCAGGCAGCC
TCGGACCGCG CCACGCGCTA CGGCATCCTG AGCAGGACGC TCGACGTCAG CAAAGCCGTC
GATCGCAGCT TCACGGTGCC GGCCGGATCG AACTGA
 
Protein sequence
MAATLGTALL LAGTAFAAAG DSIVLRVGDQ KGGNRSLLEI SGLARDLPYK IEWAEFPAAA 
PILEAINAGS LDVGYTGDLS FLTVYAGGAP IKAIGGTRSD AKTQAILVRK DSPIKSAVDL
KGKRLAGTRG GWGQFLIDAT LEKAGYKLDE ATFAPLGPVD AKVALLAGSV DAWAVWEPYI
SYATLKDGAR VVSHGEGLTP TITFIVASDT AIATKRAALQ DFVNRLNQAR LWSLDHVADY
ARSTAELTKL PEDVLLAAYQ AQRTTPIVID DVVVTEVQAA SDRATRYGIL SRTLDVSKAV
DRSFTVPAGS N