Gene BBta_3286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3286 
Symbol 
ID5154028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3440152 
End bp3441552 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content67% 
IMG OID640558149 
Producthypothetical protein 
Protein accessionYP_001239296 
Protein GI148254711 
COG category[S] Function unknown 
COG ID[COG4529] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.694377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.162486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCATCG TCGGTGGCGG AGCATCCGGC GTTCTGCTGG CCTATCAGTT GCTGCAGCAG 
GCCCATTCCA ACGTCCGCGT TACCCTGATC GAGAAGCGCC CGGAGGTCGG CCGCGGGCTC
GCCTACCACA CCGGAAATGC CGATCATCTG CTGAACGTGC GTGCCGCCAA TATGAGCGCG
CTGCCTGAGG ATCCTGATCA TTTCTGGCGC TGGCTGTCGT CTCATGAGCA CGGACAGCAG
CTCTGTCCCG ACCCGTTCTG CTTTGTACCA CGCCGCCTCT ATGGCGATTA CATTGCGAGC
CTCATCGCAC CGTTCCTGGC CGAGGACGAT GGCGCGCGCC GTCTGACCAT CATTCGCGGC
GAATGTGTCG CTGTCAGCGA GGGTGCCAGC GGCGTCACCG TCAGCCTCGC CGACGGCACG
CGTCAGCTCG GCGACGTCGC CGTGCTCGCG ACCGGCCACG ATGCCGCGGT TCCGCGCTCG
GCCTGGCACG CTGATCCATG GATCTCCCCT TCCGTGCCGG GCTTCAGCCA GGATGCGACG
GTGCTGATTC TCGGCACCGG CCTGACCATG GCGGACTACG TGCTGTCGCT GCTACGCGCC
GGCCATCGCG GCCCGATCGT GGCGATGTCG CGCCGCGGGC TCATGGCCAA GGGCCATCGG
CGCATCGCGC CCTGCAAGAT CAGCGAGGAC GAGATTCCGT TCGGCGCTCC CGGCAGCACG
CTGCTGCGCT GGTTCCGCCA ACGCATTGCC GCCCACGTCG CTGACGGAGG CGACTGGCGC
GGCGTCATCG ATGCGATCAG GCCGTTCAGC CACCGGCTGT GGCACGAATT GCCACAGTCA
TCGAAGCGCA GCTTTCTGGA GCATGCGCGG GCGTGGTGGG ACGTCCACCG GCATCGGATG
GCACCGGAGG TCGAGGCGCG TATCGCAACA GCGATCGCGG ATGGGCAACT GCGCATTGCC
GCAGCCAAGC TCGTCAAGAT CGATGGCGGC TCCGTCGCTG GACGGGCGCA TTATCGCCGC
CGCGGCCGCA GCGAGATCGA GACCCTGGAG GTCGGCGCCG TGATCGACTG CACGGGCATC
GTCAGGGATC CTCGCGCCAC GGCCAATCCG GCGGTGCGCA GCCTGTTCGA TCAAGGGCTC
GCGCGCTGTG ATCCGCTCCG GATCGGCATC GAGGTCACGG CCGATTGCGC CGTCGTCGGC
GCCGATGGCA CGCCCTCGCA ACGCCTGTTC GCAATCGGCC CGCTGACCCG CGCCGCCTTC
TGGGAGATCA TCGCCATCCC AGACATCCGC AGTCAGTGCG CTGCGCTTGC CAATCGATTG
GTGCAAGCGC AGCCGATCGA GGTGCCGCCG CGCGAGGCGC CGGCACTCGC CGCCGCTCCC
GATCACCAGG TCGCGATATA G
 
Protein sequence
MIIVGGGASG VLLAYQLLQQ AHSNVRVTLI EKRPEVGRGL AYHTGNADHL LNVRAANMSA 
LPEDPDHFWR WLSSHEHGQQ LCPDPFCFVP RRLYGDYIAS LIAPFLAEDD GARRLTIIRG
ECVAVSEGAS GVTVSLADGT RQLGDVAVLA TGHDAAVPRS AWHADPWISP SVPGFSQDAT
VLILGTGLTM ADYVLSLLRA GHRGPIVAMS RRGLMAKGHR RIAPCKISED EIPFGAPGST
LLRWFRQRIA AHVADGGDWR GVIDAIRPFS HRLWHELPQS SKRSFLEHAR AWWDVHRHRM
APEVEARIAT AIADGQLRIA AAKLVKIDGG SVAGRAHYRR RGRSEIETLE VGAVIDCTGI
VRDPRATANP AVRSLFDQGL ARCDPLRIGI EVTADCAVVG ADGTPSQRLF AIGPLTRAAF
WEIIAIPDIR SQCAALANRL VQAQPIEVPP REAPALAAAP DHQVAI