Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3269 |
Symbol | |
ID | 5153846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3424245 |
End bp | 3425258 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640558133 |
Product | transketolase subunit B |
Protein accession | YP_001239280 |
Protein GI | 148254695 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3958] Transketolase, C-terminal subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.444228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCGA CAAGACCCGC ACCGGATCTG AGCAAGCCGC GCCTGACGAC ATCGGCGATG ATCGCCTCGA TTGCCTCCGA GGGCCAGCGC ACCAGGCCGG CGCCGTTCGG CCACGCGCTG GTCGAACTGG CGCGCCGCCG GCCCGATGTG CTCGGCATGA CCGCGGACCT CGGCAAGTAC ACCGACCTGC ATATCTTCGC GAAGGAATTC CCCGAGCGCT ATTATCAAAT GGGCATGGCC GAGCAGCTCC TGTTCGGCGC CGCGTCCGGC TTGGCCGCCG AAGGGTTCAT GCCGTTCGCA ACCACTTACG CCGTGTTCGC CTCGCGCCGC GCTTATGACT TCATCCATCA GACGATCGCC GAGGAAGATC GCAATGTGAA GATCGTCTGC GCGCTGCCCG GCCTGACCTC CGGCTACGGC CCGAGCCACC AGGCGGCCGA GGATCTCGCG CTGATGCGGG CGATGCCGAA CATGACCGTG ATCGATCCCT GTGACGCGCA TGAGATCGAG CAGGTCGTGC CGGCCATGGC GGCGCATCAG GGCCCGGTCT ATATGCGGCT GCTGCGCGGC CAGGTGCCTC TCGTTCTCGA TGAATACGAC TACACATTCG AGCTCGGCAA GGCCAAGCTG CTGCGCGACG GCCGCGACGT GCTGATGATC TCCTCCGGCC TGATGACCAT GCGCGCGCTC GAGGCGGCCA AGGCGCTGTC TGATGATCGC GTCGACGTCG CCGTGCTGCA CGTCCCGACC ATCAAGCCAC TCGATGCAGA GACCATCCGG CGCGAGGCGG GCCGGTCGGG CCGCCTGGTG GTGGTCGCCG AAAATCACAC GGTGATCGGC GGCCTCGGCG AGGCCGTCGC CGGCCTGCTG ATGCGGGCGG GCGTGCATGT GCCGTTCCGG CAGATCGGCC TGCCGGACGC GTTCCTCGAC GCAGGCGCGT TGCCGACGCT GCACGACCGC TACGGCATCT CGCTTTCGGA GGTCGCGAAG CAGGTGAAGG CCTGGCTCAA ATAG
|
Protein sequence | MKSTRPAPDL SKPRLTTSAM IASIASEGQR TRPAPFGHAL VELARRRPDV LGMTADLGKY TDLHIFAKEF PERYYQMGMA EQLLFGAASG LAAEGFMPFA TTYAVFASRR AYDFIHQTIA EEDRNVKIVC ALPGLTSGYG PSHQAAEDLA LMRAMPNMTV IDPCDAHEIE QVVPAMAAHQ GPVYMRLLRG QVPLVLDEYD YTFELGKAKL LRDGRDVLMI SSGLMTMRAL EAAKALSDDR VDVAVLHVPT IKPLDAETIR REAGRSGRLV VVAENHTVIG GLGEAVAGLL MRAGVHVPFR QIGLPDAFLD AGALPTLHDR YGISLSEVAK QVKAWLK
|
| |