Gene BBta_3258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3258 
Symbol 
ID5153811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3412975 
End bp3414612 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content65% 
IMG OID640558123 
Productcrotonobetaine/carnitine-CoA ligase 
Protein accessionYP_001239270 
Protein GI148254685 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.15308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGACAG ACGTATGTGA TCCCGTCGCG GAGCGTGACG CCTTGCCGAG CTGGGCGCGC 
GCGGTCGCGC GATTCTCGCC GTCCGAAAGG GTGCTTCCGG CGATTCTGCA ACGGCAGGCG
GAACACTACG GCGAGCGGGT GTTGTTCGTG TCTGGGGAGG AGCGCTGGAC CTATGCGGAC
ACGGTCCAGA TTGCCGCCGC ATCGGCACAG ACGCTGATCG AGGCCGGACT CAAGCCGGGC
GATCGCGTCG CGTTGATGTG CTCGAACCGG CCGGAGTTTC TTCGGGTCTA TCTCGGCTGC
GCCTGGCTTG GTGCGATCGT CGTGCCGATC AATACGGCGC TGCGAGGTCT GCAACTGTCC
CATGTGCTTC GCAACTCGCG CCCCGCGCTG CTGGTCGTCG AAGCTCCGTA TCTCGCGGCG
ATCGAGACGA TCGAGCCCGA TGTTCAACTG CCGCCGTCGA TCTGGATCAT CGGATCGGCC
GTGGAGACCG CGCTGTCAGC TGTCCCGCTG CCGCCGCTCG GCGCCTGTGC ATGCGCTGGC
GCGATACGCC CGGCCGACAC GGTGGCCATC CTCTACACGT CCGGCACGAC CGGGCCTTCG
AAGGGCGTTT GCTGCCCGCA GGCCCAGATG TTCTGGTGGG GTATCTATTC GGCGCGGGCG
CTCGGCCTCC GCGAGGGCGA TGTGCTGTTC ACGACGCTGC CGCTCTTCCA CACCAATGCG
TTGAATGCGT TCTATCAGGC GATGCTGAAC GGATGTACCT ACGTCCTGGA GCCGAAATTC
TCCGCCTCGG GTTATTGGGC GGCGGCGCGA CGGCACCAGG CAACCGTGGG CTATCTGCTC
GGCGCCATGG CCTCGATGCT GCTGGCGCAG CCGAAGCGGG AGGAGGAGTC CACGCACGGC
CTGCGCGTCG CGCTTGGCGG CGGTGTGCCG GCGCAGGTGC ATCGATCCTT CTTCGAACGG
TTCGGCGTTC CCCTGCTCGA CGGCTACGGC TCCACGGAAA CGAACTTCGT ATTTGCGGGA
ACGATTCCAT CCGATCGTCC GGGGACGATG GGCTATCTTG CGGACGGGAT CGAAGCCCGG
ATTGTCGATG AGGACGATAC GGAGCTGCCT GACGGCGAGG CTGGCGAACT CGTTCTGCGC
GCCAAGGAGC CATTCGCCTT TGCCAGCGGA TATTACGGCA TGGCCGAGAA GACCGTCGAA
GCATGGCGGA ACCTGTGGTT TCATTCCGGC GACCGCGTGG TCCGTGAGCC GAGCGGACAT
TTTCGCTTCA TCGATCGGAT GAAGGACTCG ATCCGCCGGC GCGGGGAGAA CGTATCGTCC
TGGGAGGTCG AGCAGGCGAT CCAGGCGCAT CCTGCCGTAG CGGCCTGCGC CGTCTACCCG
TTGCCATCGG AGCTGGGGGA GGATGAGGTC GCCGTCGCAA TTCTGCTCGA GCCCGGACAG
AGCTTGGAGC CTGTCGATGT CATCAGGCAT TGCGAGGCGA TGATCGCCTA TTTCGCGGTG
CCCCGCTATG TGCGCATCGT TGCGCAGATG CCGCTGACGG AGAATGGCAA GATCAAGAAG
GGCGTGTTGC GCGAGGCTGG TGTGACCGCT GACACGTGGG ATCGCGACGC GGCCGGGATT
CGTGTTCGGC GGCAGTGA
 
Protein sequence
MRTDVCDPVA ERDALPSWAR AVARFSPSER VLPAILQRQA EHYGERVLFV SGEERWTYAD 
TVQIAAASAQ TLIEAGLKPG DRVALMCSNR PEFLRVYLGC AWLGAIVVPI NTALRGLQLS
HVLRNSRPAL LVVEAPYLAA IETIEPDVQL PPSIWIIGSA VETALSAVPL PPLGACACAG
AIRPADTVAI LYTSGTTGPS KGVCCPQAQM FWWGIYSARA LGLREGDVLF TTLPLFHTNA
LNAFYQAMLN GCTYVLEPKF SASGYWAAAR RHQATVGYLL GAMASMLLAQ PKREEESTHG
LRVALGGGVP AQVHRSFFER FGVPLLDGYG STETNFVFAG TIPSDRPGTM GYLADGIEAR
IVDEDDTELP DGEAGELVLR AKEPFAFASG YYGMAEKTVE AWRNLWFHSG DRVVREPSGH
FRFIDRMKDS IRRRGENVSS WEVEQAIQAH PAVAACAVYP LPSELGEDEV AVAILLEPGQ
SLEPVDVIRH CEAMIAYFAV PRYVRIVAQM PLTENGKIKK GVLREAGVTA DTWDRDAAGI
RVRRQ