Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3258 |
Symbol | |
ID | 5153811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3412975 |
End bp | 3414612 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640558123 |
Product | crotonobetaine/carnitine-CoA ligase |
Protein accession | YP_001239270 |
Protein GI | 148254685 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.15308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGACAG ACGTATGTGA TCCCGTCGCG GAGCGTGACG CCTTGCCGAG CTGGGCGCGC GCGGTCGCGC GATTCTCGCC GTCCGAAAGG GTGCTTCCGG CGATTCTGCA ACGGCAGGCG GAACACTACG GCGAGCGGGT GTTGTTCGTG TCTGGGGAGG AGCGCTGGAC CTATGCGGAC ACGGTCCAGA TTGCCGCCGC ATCGGCACAG ACGCTGATCG AGGCCGGACT CAAGCCGGGC GATCGCGTCG CGTTGATGTG CTCGAACCGG CCGGAGTTTC TTCGGGTCTA TCTCGGCTGC GCCTGGCTTG GTGCGATCGT CGTGCCGATC AATACGGCGC TGCGAGGTCT GCAACTGTCC CATGTGCTTC GCAACTCGCG CCCCGCGCTG CTGGTCGTCG AAGCTCCGTA TCTCGCGGCG ATCGAGACGA TCGAGCCCGA TGTTCAACTG CCGCCGTCGA TCTGGATCAT CGGATCGGCC GTGGAGACCG CGCTGTCAGC TGTCCCGCTG CCGCCGCTCG GCGCCTGTGC ATGCGCTGGC GCGATACGCC CGGCCGACAC GGTGGCCATC CTCTACACGT CCGGCACGAC CGGGCCTTCG AAGGGCGTTT GCTGCCCGCA GGCCCAGATG TTCTGGTGGG GTATCTATTC GGCGCGGGCG CTCGGCCTCC GCGAGGGCGA TGTGCTGTTC ACGACGCTGC CGCTCTTCCA CACCAATGCG TTGAATGCGT TCTATCAGGC GATGCTGAAC GGATGTACCT ACGTCCTGGA GCCGAAATTC TCCGCCTCGG GTTATTGGGC GGCGGCGCGA CGGCACCAGG CAACCGTGGG CTATCTGCTC GGCGCCATGG CCTCGATGCT GCTGGCGCAG CCGAAGCGGG AGGAGGAGTC CACGCACGGC CTGCGCGTCG CGCTTGGCGG CGGTGTGCCG GCGCAGGTGC ATCGATCCTT CTTCGAACGG TTCGGCGTTC CCCTGCTCGA CGGCTACGGC TCCACGGAAA CGAACTTCGT ATTTGCGGGA ACGATTCCAT CCGATCGTCC GGGGACGATG GGCTATCTTG CGGACGGGAT CGAAGCCCGG ATTGTCGATG AGGACGATAC GGAGCTGCCT GACGGCGAGG CTGGCGAACT CGTTCTGCGC GCCAAGGAGC CATTCGCCTT TGCCAGCGGA TATTACGGCA TGGCCGAGAA GACCGTCGAA GCATGGCGGA ACCTGTGGTT TCATTCCGGC GACCGCGTGG TCCGTGAGCC GAGCGGACAT TTTCGCTTCA TCGATCGGAT GAAGGACTCG ATCCGCCGGC GCGGGGAGAA CGTATCGTCC TGGGAGGTCG AGCAGGCGAT CCAGGCGCAT CCTGCCGTAG CGGCCTGCGC CGTCTACCCG TTGCCATCGG AGCTGGGGGA GGATGAGGTC GCCGTCGCAA TTCTGCTCGA GCCCGGACAG AGCTTGGAGC CTGTCGATGT CATCAGGCAT TGCGAGGCGA TGATCGCCTA TTTCGCGGTG CCCCGCTATG TGCGCATCGT TGCGCAGATG CCGCTGACGG AGAATGGCAA GATCAAGAAG GGCGTGTTGC GCGAGGCTGG TGTGACCGCT GACACGTGGG ATCGCGACGC GGCCGGGATT CGTGTTCGGC GGCAGTGA
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Protein sequence | MRTDVCDPVA ERDALPSWAR AVARFSPSER VLPAILQRQA EHYGERVLFV SGEERWTYAD TVQIAAASAQ TLIEAGLKPG DRVALMCSNR PEFLRVYLGC AWLGAIVVPI NTALRGLQLS HVLRNSRPAL LVVEAPYLAA IETIEPDVQL PPSIWIIGSA VETALSAVPL PPLGACACAG AIRPADTVAI LYTSGTTGPS KGVCCPQAQM FWWGIYSARA LGLREGDVLF TTLPLFHTNA LNAFYQAMLN GCTYVLEPKF SASGYWAAAR RHQATVGYLL GAMASMLLAQ PKREEESTHG LRVALGGGVP AQVHRSFFER FGVPLLDGYG STETNFVFAG TIPSDRPGTM GYLADGIEAR IVDEDDTELP DGEAGELVLR AKEPFAFASG YYGMAEKTVE AWRNLWFHSG DRVVREPSGH FRFIDRMKDS IRRRGENVSS WEVEQAIQAH PAVAACAVYP LPSELGEDEV AVAILLEPGQ SLEPVDVIRH CEAMIAYFAV PRYVRIVAQM PLTENGKIKK GVLREAGVTA DTWDRDAAGI RVRRQ
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