Gene BBta_3256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3256 
Symbol 
ID5153204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3410952 
End bp3411734 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID640558121 
Producthypothetical protein 
Protein accessionYP_001239268 
Protein GI148254683 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.794257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGCT CGAACCTCCT GGAGCTAGCA GGCGCGATCT CTTCCGGCGC GGTCCGCGTC 
GTCGATTTGA CATTTACGCT CAGTCCGGAT TTTCCGGTCA TCGTGCTGCC ACCGGAATTC
AGCCCGGCGG CGCCGGTTCG GATTCAGGAG CTGTCGCGTT ACGATGCCCG CGGCCCGGCC
TGGTATTGGA ACAACGTGTC GTTCTGCGAG CACACCGGAA CTCATTTCGA CGCGCCGATC
CATTGGTTCA CCGGCAAGGA CCTGCCGAAC AACGCGGTCG ATACGATGCC CCCGAAGGAC
ATGCTGGCTC CAGCCTGCGT CATCGACTGC TCGGCTCAAG CAAAGCAGGA TCCCGATTTC
CTCCTGACGA TCCCCGTGGT CGAGGCCTGG GAAGCCCAGC ATGGTCGCAT TCCCGAGCGC
AACTGGGTGC TGCTGCGGAC GGACTGGTCG AAGAAGGGCT GGCGTGACTA TGCAAATCTG
CGCGATGACG GGGCGCACAC GCCGGGCCCG AACCCGGCGG TGATGAAGTG GCTGGTTGAG
CAGCGCGGCA TCATCGGCTT CGGCACCGAA ACCATCGGCA CGGATGCCGG CCAGGCGGGC
CATTTCGATC CGCCGTATCC GGCCCATCAT TTCCTGCATG GCGCGGGCCG CTATGGTCTG
CAGTGCCTCT GCAATCTCGA TCAGCTTCCT GCCAAGGGAG CTGTCATCAT CGCGTCGCCG
CTGAAGATTC AGAACGGGTC AGGCAGTCCG TTGCGCGTGA TCGCGCTGGT GTCGTCGAGC
TGA
 
Protein sequence
MQSSNLLELA GAISSGAVRV VDLTFTLSPD FPVIVLPPEF SPAAPVRIQE LSRYDARGPA 
WYWNNVSFCE HTGTHFDAPI HWFTGKDLPN NAVDTMPPKD MLAPACVIDC SAQAKQDPDF
LLTIPVVEAW EAQHGRIPER NWVLLRTDWS KKGWRDYANL RDDGAHTPGP NPAVMKWLVE
QRGIIGFGTE TIGTDAGQAG HFDPPYPAHH FLHGAGRYGL QCLCNLDQLP AKGAVIIASP
LKIQNGSGSP LRVIALVSSS