| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3252 |
|---|
| Symbol | |
|---|
| ID | 5152697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3407232 |
|---|
| End bp | 3408062 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640558117 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001239264 |
|---|
| Protein GI | 148254679 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4126] Hydantoin racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.280544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.486528 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCT TCTGGCAGAG CTTCGTTGAT GCGAGCGTGA ATGCGCCCTA CATGGCGCGG
CTGTCGGAGT ACCTCAACGC GATCGCAGCG CCTGGCACGA GCGTTCACGT CGAAGGAATC
TCGCCGCCTG ATCGCGAATT CGGTCGCCTC GCGGAGTTGC GCTGTGCGAT TCAGGCCATC
GACAACGGCA TCGCAGCCGA ACAGGGCGGG TTCGACGCTT TCGTCATGGG ACACTTTCAG
GATCCCGGGC TTTATGAGCT TCGCTCCGCG CTCGACATTC CGGTGATCGG GACAGGGGAG
GCGACCCTGC TTGCCGCCTC GCAGCTCGGC AGGCGGCTTG GCCTGGTGAC GCTCGATCCC
GTCTTCGAGG TCTGGCATTA TGAGCAGGCC GAACGTTACG GTCTCGGTGG TCGCATTGCC
CATGTTGTCG GGCTTGGTTG CAAGCCCGAG GATTTTGCCG CCGCGTTTGC CGGCGACCAG
GAGGCGCAGG CGCGGATGAT CAGGGACTTC GTGGCGTGTG CGCGTCCGCT GCTGGAGCGC
GGCGCCGACG TGGTGATTCC CGCCGGCGTG CTGCCGGGGC TGTTGATCGG CCGTGAACAC
GGTTTGAAGA TCGATCACGC GCCGGTGGTC AATTGCGCGG CGGTCGCCTT GAAGAATGCC
GAGATGTGGG TGCAGCTCAG GCGGCTCAAC GGGACCGAGC CGAGTCGCGG CCCCAGCTTC
AGCCGGGCCA GTGCGCTCGC CCGCGAGGAT TTTCGCGCGC TGCTCGCTTG CAACACGCAA
TTGTGCCGGG AGCCGAGTCC CGCGGTGGAG ACCAAGAATG GTGCAGCCTG A
|
|---|
| Protein sequence | MRIFWQSFVD ASVNAPYMAR LSEYLNAIAA PGTSVHVEGI SPPDREFGRL AELRCAIQAI
DNGIAAEQGG FDAFVMGHFQ DPGLYELRSA LDIPVIGTGE ATLLAASQLG RRLGLVTLDP
VFEVWHYEQA ERYGLGGRIA HVVGLGCKPE DFAAAFAGDQ EAQARMIRDF VACARPLLER
GADVVIPAGV LPGLLIGREH GLKIDHAPVV NCAAVALKNA EMWVQLRRLN GTEPSRGPSF
SRASALARED FRALLACNTQ LCREPSPAVE TKNGAA
|
|---|
| |