Gene BBta_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3249 
Symbol 
ID5152695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3404405 
End bp3405448 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content63% 
IMG OID640558115 
Productbranched chain amino acid ABC transporter permease 
Protein accessionYP_001239262 
Protein GI148254677 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.174248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.26747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCG ATATCGCCGC CATTCTTGCG ATCGACGGCA TCGCCACCGG CGCAGTCTAT 
GCGCTGGTGG CGATCGGAAC CGTGCTGATC TTCACGGTCA CCCGCGTCAT CTTCATTCCG
TTCGGCGATA TTGCCGCGTT CACCGCGCTG ACGCTGGCTG CTCTCGATGC GAAGCGGTTT
CCCGGCACCG GAACGCTCGT TCTGGTGCTG GCCTGCCTCG CAACCCTCGT GGAAATCATT
TCGCTGCTGC GCACGAACGA GCCGCGGCTC GTGCCGCGCG CGCTGCTGCT TTATCTCGCT
CTGCCATGCG CGATCGTCGG CGCAGCCTGG ATCGTGACCC GCATGGATCC GCCACTGGCG
GTCCGGCTCG TGCTCGCGCT GATGCTGATC ACCCCGATCG CTCCCCTTCT CGACCGGATC
GTGTTTCGTC CGATCGCCGA CGGCACGGTG CTGTTGTTGC TGACGGTCTC GGTCGCATTG
CATTTTGCAC TGGTCGGTCT TGGCCTGCTG TTTTTCGGAC CTGAGGGCGT GCGCACCGAA
CCGCTGACCT CGCTGTCGAC CGAGATTGCC GGCATTCTCA TCTCCGGTCA GACCATGCTG
ATCGTGATCG CGGCGCTCGT CTTCAGCGGT CTGCTTTATC TGTTCTTCGA CTTCACATTG
GTTGGCAAAT CGCTGCGCGC CACCGCCGTG AACCGGACCG GCTCGCGCCT GATGGGAATC
CGGCCGGCAC GCGCCGGGAC CATCGCCTAC CTCCTCGGCT CGCTGATGGC CGGCGTGTCG
GGCATCCTGA TCGCGCCGGT GAACACCGTG TTCTACGATT CCGGCTTCCT GATCGGCCTC
AAGGCTTTCG TCGGCGCGAT CGTGGGCGGC CTGACCAGCT ATCCCGGAGC GGCGATAGGC
GCTGTCGGCG TCGGCATTCT CGAAAGCTTC GCATCCTTCG AGAGCAGCGC GCTGAAGGAT
GTCATCGTGT TCTCGCTCCT GATCCCGATT CTGATCTGGC GATCCCTATC CTCCCTGCAT
TCCGAGGAGG AGATCGAAGA ATGA
 
Protein sequence
MTSDIAAILA IDGIATGAVY ALVAIGTVLI FTVTRVIFIP FGDIAAFTAL TLAALDAKRF 
PGTGTLVLVL ACLATLVEII SLLRTNEPRL VPRALLLYLA LPCAIVGAAW IVTRMDPPLA
VRLVLALMLI TPIAPLLDRI VFRPIADGTV LLLLTVSVAL HFALVGLGLL FFGPEGVRTE
PLTSLSTEIA GILISGQTML IVIAALVFSG LLYLFFDFTL VGKSLRATAV NRTGSRLMGI
RPARAGTIAY LLGSLMAGVS GILIAPVNTV FYDSGFLIGL KAFVGAIVGG LTSYPGAAIG
AVGVGILESF ASFESSALKD VIVFSLLIPI LIWRSLSSLH SEEEIEE